RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 FAM196BA6NMK8 535 aa18.68■□□□□ 0.58
MUC1-228ENST00000620103 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
MUC1-228ENST00000620103 BRCA2P51587 3418 aa18.68■□□□□ 0.58
MUC1-228ENST00000620103 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
MUC1-228ENST00000620103 POTEFA5A3E0 1075 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 BCRP11274 1271 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 CTGFP29279 349 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 PRMT2P55345 433 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 DHX36Q9H2U1 1008 aaKnown RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 PHIPQ8WWQ0 1821 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 HSP90AB4PQ58FF6 505 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 METTL16Q86W50 562 aaKnown RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 RPAP2Q8IXW5 612 aaPredicted RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.67■□□□□ 0.58
MUC1-228ENST00000620103 PI4KBQ9UBF8 816 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 DDX19BQ9UMR2 479 aa18.67■□□□□ 0.58
MUC1-228ENST00000620103 CYP2C8P10632 490 aa18.66■□□□□ 0.58
MUC1-228ENST00000620103 RRP1BQ14684 758 aaKnown RBP18.66■□□□□ 0.58
MUC1-228ENST00000620103 SLC9C1Q4G0N8 1177 aa18.66■□□□□ 0.58
MUC1-228ENST00000620103 CCDC84Q86UT8 332 aaPredicted RBP18.66■□□□□ 0.58
MUC1-228ENST00000620103 TRIM47Q96LD4 638 aa18.66■□□□□ 0.58
MUC1-228ENST00000620103 FLT1P17948 1338 aa18.66■□□□□ 0.58
MUC1-228ENST00000620103 ZSWIM8A7E2V4 1837 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 CAP2P40123 477 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
MUC1-228ENST00000620103 NBPF11Q86T75 865 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 AACSQ86V21 672 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 RHPN1Q8TCX5 695 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
MUC1-228ENST00000620103 PTPRFP10586 1907 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 PSMC4P43686 418 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 GADL1Q6ZQY3 521 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 SRRDQ9UH36 339 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 COG6Q9Y2V7 657 aa18.65■□□□□ 0.58
MUC1-228ENST00000620103 MAPKAPK5Q8IW41 473 aa18.64■□□□□ 0.57
MUC1-228ENST00000620103 AGTPBP1Q9UPW5 1226 aa18.64■□□□□ 0.57
MUC1-228ENST00000620103 MYO5AQ9Y4I1 1855 aaKnown RBP18.64■□□□□ 0.57
MUC1-228ENST00000620103 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
MUC1-228ENST00000620103 OSBPP22059 807 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 CYP7A1P22680 504 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 FOXP4Q8IVH2 680 aaPredicted RBP18.63■□□□□ 0.57
MUC1-228ENST00000620103 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
MUC1-228ENST00000620103 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 ANTXR1Q9H6X2 564 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 DNAJC18Q9H819 358 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 SIPA1L1O43166 1804 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 DYNLL1P63167 89 aaKnown RBP18.63■□□□□ 0.57
MUC1-228ENST00000620103 PRPF38BQ5VTL8 546 aaKnown RBP18.63■□□□□ 0.57
MUC1-228ENST00000620103 CERS3Q8IU89 383 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 NDUFB9Q9Y6M9 179 aa18.63■□□□□ 0.57
MUC1-228ENST00000620103 HMMRO75330 724 aa18.62■□□□□ 0.57
MUC1-228ENST00000620103 HOXD10P28358 340 aa18.62■□□□□ 0.57
MUC1-228ENST00000620103 SPP2Q13103 211 aa18.62■□□□□ 0.57
MUC1-228ENST00000620103 KIF1BPQ96EK5 621 aa18.62■□□□□ 0.57
MUC1-228ENST00000620103 FOCADQ5VW36 1801 aa18.62■□□□□ 0.57
MUC1-228ENST00000620103 USP17L5A8MUK1 530 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 EN2P19622 333 aaPredicted RBP18.61■□□□□ 0.57
MUC1-228ENST00000620103 SH3D19Q5HYK7 790 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 WDR18Q9BV38 432 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 TMEM106CQ9BVX2 250 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
MUC1-228ENST00000620103 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 CDK5RAP2Q96SN8 1893 aa18.61■□□□□ 0.57
MUC1-228ENST00000620103 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
MUC1-228ENST00000620103 MAP3K12Q12852 859 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 TREML2Q5T2D2 321 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
MUC1-228ENST00000620103 MAGEB6Q8N7X4 407 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.6■□□□□ 0.57
MUC1-228ENST00000620103 GINM1Q9NU53 330 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 ASNSP08243 561 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 FCGRTP55899 365 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 JAG1P78504 1218 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
MUC1-228ENST00000620103 IPO9Q96P70 1041 aaKnown RBP18.6■□□□□ 0.57
MUC1-228ENST00000620103 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
MUC1-228ENST00000620103 ECM2O94769 699 aaPredicted RBP18.59■□□□□ 0.57
MUC1-228ENST00000620103 AS3MTQ9HBK9 375 aa18.59■□□□□ 0.57
MUC1-228ENST00000620103 MYPNQ86TC9 1320 aa18.59■□□□□ 0.57
MUC1-228ENST00000620103 HMGCS2P54868 508 aa18.58■□□□□ 0.57
MUC1-228ENST00000620103 SMCR8Q8TEV9 937 aaPredicted RBP18.58■□□□□ 0.57
MUC1-228ENST00000620103 RIOK1Q9BRS2 568 aaKnown RBP18.58■□□□□ 0.57
MUC1-228ENST00000620103 PNMA3Q9UL41 463 aa18.58■□□□□ 0.57
MUC1-228ENST00000620103 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.57
MUC1-228ENST00000620103 HLA-DOAP06340 250 aa18.58■□□□□ 0.56
MUC1-228ENST00000620103 ANP32AP39687 249 aaKnown RBP18.58■□□□□ 0.56
MUC1-228ENST00000620103 PRKCZQ05513 592 aa18.58■□□□□ 0.56
MUC1-228ENST00000620103 TTF1Q15361 905 aaPredicted RBP18.58■□□□□ 0.56
MUC1-228ENST00000620103 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms