RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ANKRD2Q9GZV1 360 aa22.42■■□□□ 1.18
LAPTM4B-204ENST00000619747 LAMB2P55268 1798 aa22.42■■□□□ 1.18
LAPTM4B-204ENST00000619747 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
LAPTM4B-204ENST00000619747 LIFRP42702 1097 aa22.41■■□□□ 1.18
LAPTM4B-204ENST00000619747 DNAJC25Q9H1X3 360 aa22.41■■□□□ 1.18
LAPTM4B-204ENST00000619747 hCG_1642624A0A1W2PR95 340 aa22.41■■□□□ 1.18
LAPTM4B-204ENST00000619747 LINC00301Q8NCQ3 95 aa22.41■■□□□ 1.18
LAPTM4B-204ENST00000619747 RIOK3O14730 519 aaKnown RBP22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 CDKL5O76039 1030 aa22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 ANKRD7Q92527 254 aa22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 SNW1Q13573 536 aaKnown RBP22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 PRR5LQ6MZQ0 368 aa22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 KCNJ14Q9UNX9 436 aa22.4■■□□□ 1.18
LAPTM4B-204ENST00000619747 UVSSAQ2YD98 709 aa22.39■■□□□ 1.18
LAPTM4B-204ENST00000619747 OGFRQ9NZT2 677 aa22.39■■□□□ 1.18
LAPTM4B-204ENST00000619747 BAZ2BQ9UIF8 2168 aaKnown RBP22.39■■□□□ 1.18
LAPTM4B-204ENST00000619747 SLFN14P0C7P3 912 aa22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 CYP2D6P10635 497 aa22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 RNF41Q9H4P4 317 aaPredicted RBP22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 RTEL1Q9NZ71 1219 aa22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 TNKSO95271 1327 aa22.39■■□□□ 1.17
LAPTM4B-204ENST00000619747 RTN1Q16799 776 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 SPC24Q8NBT2 197 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 FEZ1Q99689 392 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 NMT2O60551 498 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 KINO60870 393 aaKnown RBP22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 CTR9Q6PD62 1173 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 CASZ1Q86V15 1759 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 SCN7AQ01118 1682 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 SPTLC2O15270 562 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 DIXDC1Q155Q3 683 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 GRIK5Q16478 980 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 ZNF654Q8IZM8 581 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 FAM200AQ8TCP9 573 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 ESR2Q92731 530 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 CBX8Q9HC52 389 aa22.38■■□□□ 1.17
LAPTM4B-204ENST00000619747 NDUFA8P51970 172 aa22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 IRX3P78415 501 aaPredicted RBP22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 TRIM29Q14134 588 aa22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 FAM47AQ5JRC9 791 aa22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 DZIP1Q86YF9 867 aaKnown RBP22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 RPGRQ92834 1020 aaKnown RBP22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 GYS1P13807 737 aa22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 THSD7AQ9UPZ6 1657 aa22.37■■□□□ 1.17
LAPTM4B-204ENST00000619747 GRAPQ13588 217 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 BRAPQ7Z569 592 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 GRAPLQ8TC17 118 aaPredicted RBP22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 SDF4Q9BRK5 362 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 MYH2Q9UKX2 1941 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 SERPINB2P05120 415 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 ATP2B1P20020 1258 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 FAM160A1Q05DH4 1040 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 ENAHQ8N8S7 591 aaPredicted RBP22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 FANCBQ8NB91 859 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 CHD4Q14839 1912 aa22.36■■□□□ 1.17
LAPTM4B-204ENST00000619747 CACNA1SQ13698 1873 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 BTBD18B2RXH4 712 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 ONECUT3O60422 494 aaPredicted RBP22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 ZNF165P49910 485 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 ATL3Q6DD88 541 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 ENGASEQ8NFI3 743 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 MYH13Q9UKX3 1938 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 GABPB1Q06547 395 aaPredicted RBP22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 ADALQ6DHV7 355 aa22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 MRPS27Q92552 414 aaKnown RBP22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 DCP1AQ9NPI6 582 aaPredicted RBP22.35■■□□□ 1.17
LAPTM4B-204ENST00000619747 TIGD1Q96MW7 591 aa22.34■■□□□ 1.17
LAPTM4B-204ENST00000619747 POLR3EQ9NVU0 708 aa22.34■■□□□ 1.17
LAPTM4B-204ENST00000619747 ZNF831Q5JPB2 1677 aa22.34■■□□□ 1.17
LAPTM4B-204ENST00000619747 RGL2O15211 777 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 WDHD1O75717 1129 aaPredicted RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 USP17L8P0C7I0 530 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 IFNAR1P17181 557 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 CAPN2P17655 700 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 RBM43Q6ZSC3 357 aaKnown RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 ZSCAN10Q96SZ4 725 aaPredicted RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 C4AP0C0L4 1744 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 C4BP0C0L5 1744 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 CCDC66A2RUB6 948 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 SEMA3EO15041 775 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 FMNL1O95466 1100 aaPredicted RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 GPSM2P81274 684 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 IFIT1BQ5T764 474 aaKnown RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 CRNKL1Q9BZJ0 848 aaKnown RBP22.33■■□□□ 1.17
LAPTM4B-204ENST00000619747 SEC23AQ15436 765 aa22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 C11orf57Q6ZUT1 292 aaPredicted RBP22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 KCNG4Q8TDN1 519 aa22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 CLIC6Q96NY7 704 aa22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 SPTLC3Q9NUV7 552 aa22.33■■□□□ 1.16
LAPTM4B-204ENST00000619747 TNRC6CQ9HCJ0 1690 aaKnown RBP22.32■■□□□ 1.16
LAPTM4B-204ENST00000619747 NR5A1Q13285 461 aa22.32■■□□□ 1.16
LAPTM4B-204ENST00000619747 ZBTB9Q96C00 473 aa22.32■■□□□ 1.16
LAPTM4B-204ENST00000619747 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms