RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
CYFIP1-210ENST00000619290 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
CYFIP1-210ENST00000619290 PHIPQ8WWQ0 1821 aa15.37■□□□□ 0.05
CYFIP1-210ENST00000619290 TTC28Q96AY4 2481 aa15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 ZKSCAN1P17029 563 aaPredicted RBP15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 GNL3LQ9NVN8 582 aaKnown RBP15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 MORF4L1Q9UBU8 362 aa15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
CYFIP1-210ENST00000619290 FAM196BA6NMK8 535 aa15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 EYA2O00167 538 aa15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 SOCS4Q8WXH5 440 aa15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 SEMA6BQ9H3T3 888 aa15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 GAKO14976 1311 aa15.35■□□□□ 0.05
CYFIP1-210ENST00000619290 TBC1D12O60347 775 aa15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 PEX10O60683 326 aa15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 COL9A1P20849 921 aa15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 MYLIPQ8WY64 445 aa15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 SYMPKQ92797 1274 aaKnown RBP15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 OSBPL5Q9H0X9 879 aaPredicted RBP15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
CYFIP1-210ENST00000619290 PLXNB2O15031 1838 aa15.33■□□□□ 0.05
CYFIP1-210ENST00000619290 CDH23Q9H251 3354 aa15.33■□□□□ 0.05
CYFIP1-210ENST00000619290 MYH13Q9UKX3 1938 aa15.33■□□□□ 0.05
CYFIP1-210ENST00000619290 BTDP43251 543 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 CCL14Q16627 93 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 GPRC5AQ8NFJ5 357 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 TBC1D2Q9BYX2 928 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 TXNRD2Q9NNW7 524 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
CYFIP1-210ENST00000619290 SEMA3EO15041 775 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 PHKA1P46020 1223 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 RFX5P48382 616 aaPredicted RBP15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 ATN1P54259 1190 aaPredicted RBP15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 ATG9AQ7Z3C6 839 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 WDR63Q8IWG1 891 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 ZGPATQ8N5A5 531 aaKnown RBP15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 USP6NLQ92738 828 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 PRUNE2Q8WUY3 3088 aa15.32■□□□□ 0.04
CYFIP1-210ENST00000619290 MUC3AQ02505 3323 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 USP17L5A8MUK1 530 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 FOSL2P15408 326 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 MAPK4P31152 587 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 CAP2P40123 477 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 RGS2P41220 211 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 SHHQ15465 462 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 TTYH1Q9H313 450 aaPredicted RBP15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
CYFIP1-210ENST00000619290 MROH7-TTC4A0A0A0MT08 1334 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 HERVK_113P62684 666 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 MTMR2Q13614 643 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 GPR142Q7Z601 462 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 APBA2Q99767 749 aa15.3■□□□□ 0.04
CYFIP1-210ENST00000619290 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 RHBDL3P58872 404 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 RTP1P59025 263 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 Q3C1V9 767 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 MORN1Q5T089 497 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 PLEKHH3Q7Z736 793 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 SIL1Q9H173 461 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 PORCNQ9H237 461 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
CYFIP1-210ENST00000619290 MYH2Q9UKX2 1941 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 GPR75-ASB3A0A0A6YYF3 556 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 TNFRSF10AO00220 468 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 BACE1P56817 501 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 ERVK-9P63128 1117 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 ERVK-24P63145 666 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 CCDC102BQ68D86 513 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 CWC22Q9HCG8 908 aaKnown RBP15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 ATP11BQ9Y2G3 1177 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 MAST2Q6P0Q8 1798 aa15.28■□□□□ 0.04
CYFIP1-210ENST00000619290 DNAH12Q6ZR08 3092 aa15.27■□□□□ 0.04
CYFIP1-210ENST00000619290 ADORA1P30542 326 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms