RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PLBD2Q8NHP8 589 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 HOMER2Q9NSB8 354 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 GOLGA6AQ9NYA3 693 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 KLHL42Q9P2K6 505 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 MRPL12P52815 198 aaKnown RBP3.42□□□□□ -1.86
LPP-221ENST00000618621 MYL5Q02045 173 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 CCDC65Q8IXS2 484 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 DISP1Q96F81 1524 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 PLCB1Q9NQ66 1216 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 MAGI2Q86UL8 1455 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 PHACTR2O75167 634 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 RHOXF2BP0C7M4 288 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 TNNC1P63316 161 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 CCDC122Q5T0U0 273 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 LGSNQ5TDP6 509 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 RAB11FIP4Q86YS3 637 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 RHOXF2Q9BQY4 288 aa3.42□□□□□ -1.86
LPP-221ENST00000618621 BICC1Q9H694 974 aaKnown RBP3.42□□□□□ -1.86
LPP-221ENST00000618621 RIMS2Q9UQ26 1411 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 TNNI3KQ59H18 835 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 NELFBQ8WX92 580 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 UBA5Q9GZZ9 404 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 FPGT-TNNI3KV9GXZ4 949 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 IRS4O14654 1257 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 IBSPP21815 317 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 PAK1Q13153 545 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PUM3Q15397 648 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 TPCN1Q9ULQ1 816 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 HARSP12081 509 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 ATP11AP98196 1134 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 OSBPL5Q9H0X9 879 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 PEG3Q9GZU2 1588 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 UHRF1BP1LA0JNW5 1464 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 KIF3CO14782 793 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 CIB2O75838 187 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 FAM182BQ5T319 152 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ANGEL1Q9UNK9 670 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 ALS2CLQ60I27 953 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 CCDC174Q6PII3 467 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 BANK1Q8NDB2 785 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 CSRNP2Q9H175 543 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ATP2A1O14983 1001 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 CFAP65Q6ZU64 1925 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 GBP1P32455 592 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 CCDC6Q16204 474 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 TDRD12Q587J7 1177 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 RUNDC3BQ96NL0 473 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PPME1Q9Y570 386 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 IQGAP2Q13576 1575 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ATP5DP30049 168 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 XPO4Q9C0E2 1151 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 GEMIN8Q9NWZ8 242 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 LMTK3Q96Q04 1460 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 POLR2DO15514 142 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 KCNQ3O43525 872 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 VIMP08670 466 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 STX17P56962 302 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ARID5BQ14865 1188 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 MRFAP1L1Q96HT8 127 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 EFCAB8A8MWE9 144 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 DCAF5Q96JK2 942 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PPIP5K1Q6PFW1 1433 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 UGGT2Q9NYU1 1516 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 GOLGA6BA6NDN3 693 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 B4DLN1 442 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 NDC80O14777 642 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ACTN4O43707 911 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 HOXA7P31268 230 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 HOXC9P31274 260 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 LACTBP83111 547 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 FAM98CQ17RN3 349 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 SSH3Q8TE77 659 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 NLRP3Q96P20 1036 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ARHGEF12Q9NZN5 1544 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PRDM2Q13029 1718 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 FAM13AO94988 1023 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 HLA-DOAP06340 250 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 MMP14P50281 582 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 SARM1Q6SZW1 724 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 GSTA5Q7RTV2 222 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 NBPF5PQ86XG9 351 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 P3H4Q92791 437 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 EAF2Q96CJ1 260 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 USP28Q96RU2 1077 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 MYO1AQ9UBC5 1043 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PIK3R4Q99570 1358 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PSDA5PKW4 1024 aaPredicted RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 PFKFB2O60825 505 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 NEBLO76041 1014 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 SPATS2Q86XZ4 545 aaKnown RBP3.41□□□□□ -1.86
LPP-221ENST00000618621 ATP2C2O75185 946 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 ASIC2Q16515 512 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 HS2ST1Q7LGA3 356 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 SETDB2Q96T68 719 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms