RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
CPEB1-216ENST00000618449 F8W031 263 aaPredicted RBP13.16□□□□□ -0.3
CPEB1-216ENST00000618449 C21orf2O43822 256 aa13.16□□□□□ -0.3
CPEB1-216ENST00000618449 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
CPEB1-216ENST00000618449 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
CPEB1-216ENST00000618449 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
CPEB1-216ENST00000618449 GAKO14976 1311 aa13.16□□□□□ -0.3
CPEB1-216ENST00000618449 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 FDPSP14324 419 aaKnown RBP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 CLCN1P35523 988 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 KRT85P78386 507 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 SUGT1Q9Y2Z0 365 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 LAMB1P07942 1786 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 ZBTB43O43298 467 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
CPEB1-216ENST00000618449 RHBDL3P58872 404 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 WTAPQ15007 396 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 CERS3Q8IU89 383 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 MAPKAPK5Q8IW41 473 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 MYL10Q9BUA6 226 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
CPEB1-216ENST00000618449 ERICH2A1L162 156 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 CPLX1O14810 134 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 DPEP1P16444 411 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 KCNA3P22001 575 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
CPEB1-216ENST00000618449 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 CC2D2BQ6DHV5 1058 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
CPEB1-216ENST00000618449 ORC4O43929 436 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 ECE2O60344 883 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 TNKSO95271 1327 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
CPEB1-216ENST00000618449 CDC27P30260 824 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 SEC23AQ15436 765 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 AOC3Q16853 763 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
CPEB1-216ENST00000618449 H3BQV1 296 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
CPEB1-216ENST00000618449 PLCG2P16885 1265 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
CPEB1-216ENST00000618449 ELP1O95163 1332 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 FOSBP53539 338 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 PDE4BQ07343 736 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 KIAA2012Q0VF49 1180 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 FAM173BQ6P4H8 233 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
CPEB1-216ENST00000618449 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
CPEB1-216ENST00000618449 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
CPEB1-216ENST00000618449 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
CPEB1-216ENST00000618449 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 FLT1P17948 1338 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 SCNN1DP51172 638 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 PLCD1P51178 756 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 STRIP1Q5VSL9 837 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 ENAHQ8N8S7 591 aaPredicted RBP13.12□□□□□ -0.31
CPEB1-216ENST00000618449 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 FAM47AQ5JRC9 791 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 AMOTL1Q8IY63 956 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
CPEB1-216ENST00000618449 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
CPEB1-216ENST00000618449 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
CPEB1-216ENST00000618449 RESTQ13127 1097 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 NTRK3Q16288 839 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 NMT2O60551 498 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
CPEB1-216ENST00000618449 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 NID2Q14112 1375 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
CPEB1-216ENST00000618449 CDKL5O76039 1030 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms