RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 CCDC152Q4G0S7 254 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 SLF1Q9BQI6 1058 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 H7C1W4 665 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 MYO1BO43795 1136 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
RECQL4-209ENST00000617875 YEATS4O95619 227 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
RECQL4-209ENST00000617875 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
RECQL4-209ENST00000617875 CTSWP56202 376 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 RNASE9P60153 205 aaKnown RBP18.17■□□□□ 0.5
RECQL4-209ENST00000617875 TERF2Q15554 542 aa18.17■□□□□ 0.5
RECQL4-209ENST00000617875 STAT6P42226 847 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 UBXN1Q04323 297 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 LCORLQ8N3X6 602 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
RECQL4-209ENST00000617875 AKNAD1Q5T1N1 836 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 CCDC70Q6NSX1 233 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 USP49Q70CQ1 688 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
RECQL4-209ENST00000617875 PIGBQ92521 554 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 KAT14Q9H8E8 782 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 STIM1Q13586 685 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
RECQL4-209ENST00000617875 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 GPKOWQ92917 476 aaPredicted RBP eCLIP18.16■□□□□ 0.5
RECQL4-209ENST00000617875 ACBD3Q9H3P7 528 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
RECQL4-209ENST00000617875 SH3TC1Q8TE82 1336 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 FAM205CA6NFA0 338 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 PDE8BO95263 885 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 GOLGA8HP0CJ92 632 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■□□□□ 8.5
RECQL4-209ENST00000617875 IQCB1Q15051 598 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 PTPROQ16827 1216 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 NOSTRINQ8IVI9 506 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 CMA1P23946 247 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 MRPS25P82663 173 aaKnown RBP18.15■□□□□ 0.5
RECQL4-209ENST00000617875 RAD51AP2Q09MP3 1159 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 PICALMQ13492 652 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 CCDC181Q5TID7 509 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 CCDC175P0C221 793 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 SLC39A14Q15043 492 aa18.15■□□□□ 0.5
RECQL4-209ENST00000617875 DHX40Q8IX18 779 aaKnown RBP18.15■□□□□ 0.5
RECQL4-209ENST00000617875 FMR1NBQ8N0W7 255 aaPredicted RBP18.15■□□□□ 0.5
RECQL4-209ENST00000617875 MACROD2A1Z1Q3 448 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 RFX5P48382 616 aaPredicted RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 GRIN1Q05586 938 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 SPTY2D1Q68D10 685 aaPredicted RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 ZBTB38Q8NAP3 1195 aaPredicted RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 CSRNP2Q9H175 543 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 SIGLEC1Q9BZZ2 1709 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 PDE8AO60658 829 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 ZPR1O75312 459 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 LRRN4CLQ8ND94 238 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 CRACR2AQ9BSW2 395 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 TEX13AQ9BXU3 409 aaPredicted RBP18.14■□□□□ 0.49
RECQL4-209ENST00000617875 FAM107BQ9H098 131 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 TNKSO95271 1327 aa18.14■□□□□ 0.49
RECQL4-209ENST00000617875 NEDD4P46934 1319 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 KRT2P35908 639 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 RASGRF1Q13972 1273 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 LPIN2Q92539 896 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 GOLGA1Q92805 767 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 CDC5LQ99459 802 aaKnown RBP18.13■□□□□ 0.49
RECQL4-209ENST00000617875 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
RECQL4-209ENST00000617875 ZMYND10O75800 440 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 LETM2Q2VYF4 491 aa18.13■□□□□ 0.49
RECQL4-209ENST00000617875 PRR29P0C7W0 189 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 HNRNPH2P55795 449 aaKnown RBP18.12■□□□□ 0.49
RECQL4-209ENST00000617875 MTF1Q14872 753 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 FANCBQ8NB91 859 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 ANKRD7Q92527 254 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 ENC1O14682 589 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 ARMCX5Q6P1M9 558 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 TMEM87BQ96K49 555 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 MMRN2Q9H8L6 949 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 PPP2R2CQ9Y2T4 447 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 NMT2O60551 498 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 CUTAO60888 179 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 ADD2P35612 726 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 ASIC1P78348 528 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 DDB1Q16531 1140 aa18.12■□□□□ 0.49
RECQL4-209ENST00000617875 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
RECQL4-209ENST00000617875 KRT9P35527 623 aa18.11■□□□□ 0.49
RECQL4-209ENST00000617875 SF3A3Q12874 501 aaKnown RBP eCLIP18.11■□□□□ 0.491e-7■■■■■ 34.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms