RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ERC1Q8IUD2 1116 aa27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 NOL10Q9BSC4 688 aaKnown RBP27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 RCAN3Q9UKA8 241 aa27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 MGAMO43451 1857 aa27.18■■□□□ 1.94
NEDD4L-237ENST00000617539 FLT1P17948 1338 aa27.17■■□□□ 1.94
NEDD4L-237ENST00000617539 BAG3O95817 575 aa27.17■■□□□ 1.94
NEDD4L-237ENST00000617539 ANTXR1Q9H6X2 564 aa27.17■■□□□ 1.94
NEDD4L-237ENST00000617539 IL1RAPL2Q9NP60 686 aa27.17■■□□□ 1.94
NEDD4L-237ENST00000617539 DDX19BQ9UMR2 479 aa27.17■■□□□ 1.94
NEDD4L-237ENST00000617539 KIAA0100Q14667 2235 aaKnown RBP27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 TRIM75PA6NK02 468 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 IGSF3O75054 1194 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 ECM2O94769 699 aaPredicted RBP27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 PLCG2P16885 1265 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 FASTKD5Q7L8L6 764 aaKnown RBP27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 MAPKAPK5Q8IW41 473 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 RHPN1Q8TCX5 695 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 TGFBRAP1Q8WUH2 860 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 ZNF333Q96JL9 665 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 TRIM47Q96LD4 638 aa27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 PARK7Q99497 189 aaKnown RBP27.16■■□□□ 1.94
NEDD4L-237ENST00000617539 BCRP11274 1271 aa27.15■■□□□ 1.94
NEDD4L-237ENST00000617539 DYNLL1P63167 89 aaKnown RBP27.15■■□□□ 1.94
NEDD4L-237ENST00000617539 KIF22Q14807 665 aa27.15■■□□□ 1.94
NEDD4L-237ENST00000617539 GADL1Q6ZQY3 521 aa27.15■■□□□ 1.94
NEDD4L-237ENST00000617539 DNAJC18Q9H819 358 aa27.15■■□□□ 1.94
NEDD4L-237ENST00000617539 MYH1P12882 1939 aa27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 IDH1O75874 414 aaKnown RBP27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 CYP7A1P22680 504 aa27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 CAP2P40123 477 aa27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 RPAP2Q8IXW5 612 aaPredicted RBP27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 HERC5Q9UII4 1024 aaKnown RBP27.14■■□□□ 1.94
NEDD4L-237ENST00000617539 PSMC4P43686 418 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 SLC9C1Q4G0N8 1177 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 HSP90AB4PQ58FF6 505 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 C20orf194Q5TEA3 1177 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 DHX36Q9H2U1 1008 aaKnown RBP27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 PI4KBQ9UBF8 816 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 SLC45A1Q9Y2W3 748 aa27.13■■□□□ 1.93
NEDD4L-237ENST00000617539 GNRH1P01148 92 aa27.12■■□□□ 1.93
NEDD4L-237ENST00000617539 JAG1P78504 1218 aa27.12■■□□□ 1.93
NEDD4L-237ENST00000617539 METTL16Q86W50 562 aaKnown RBP27.12■■□□□ 1.93
NEDD4L-237ENST00000617539 PALD1Q9ULE6 856 aa27.12■■□□□ 1.93
NEDD4L-237ENST00000617539 DDX60LQ5H9U9 1706 aaKnown RBP27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 APBB1O00213 710 aa27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 TREML2Q5T2D2 321 aa27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 MAGEB6Q8N7X4 407 aa27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 MIGA1Q8NAN2 632 aa27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 SH3TC2Q8TF17 1288 aa27.11■■□□□ 1.93
NEDD4L-237ENST00000617539 OSBPP22059 807 aa27.1■■□□□ 1.93
NEDD4L-237ENST00000617539 SPP2Q13103 211 aa27.1■■□□□ 1.93
NEDD4L-237ENST00000617539 SHROOM1Q2M3G4 852 aaPredicted RBP27.1■■□□□ 1.93
NEDD4L-237ENST00000617539 SAP30BPQ9UHR5 308 aaKnown RBP27.1■■□□□ 1.93
NEDD4L-237ENST00000617539 AGTPBP1Q9UPW5 1226 aa27.1■■□□□ 1.93
NEDD4L-237ENST00000617539 ZNF280CQ8ND82 737 aa27.09■■□□□ 1.93
NEDD4L-237ENST00000617539 KIF1BPQ96EK5 621 aa27.09■■□□□ 1.93
NEDD4L-237ENST00000617539 SRRDQ9UH36 339 aa27.09■■□□□ 1.93
NEDD4L-237ENST00000617539 HMMRO75330 724 aa27.08■■□□□ 1.93
NEDD4L-237ENST00000617539 EN2P19622 333 aaPredicted RBP27.08■■□□□ 1.93
NEDD4L-237ENST00000617539 PRMT2P55345 433 aa27.08■■□□□ 1.93
NEDD4L-237ENST00000617539 USP17L5A8MUK1 530 aa27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 FMNL1O95466 1100 aaPredicted RBP27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 MAP3K12Q12852 859 aa27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 SLC4A8Q2Y0W8 1093 aa27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 NBPF11Q86T75 865 aa27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 CLASRPQ8N2M8 674 aaKnown RBP27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 PROCA1Q8NCQ7 364 aaPredicted RBP27.07■■□□□ 1.92
NEDD4L-237ENST00000617539 HMGCS2P54868 508 aa27.06■■□□□ 1.92
NEDD4L-237ENST00000617539 FOXP4Q8IVH2 680 aaPredicted RBP27.06■■□□□ 1.92
NEDD4L-237ENST00000617539 TBC1D2Q9BYX2 928 aa27.06■■□□□ 1.92
NEDD4L-237ENST00000617539 NAV1Q8NEY1 1877 aa27.06■■□□□ 1.92
NEDD4L-237ENST00000617539 MYCP01106 439 aaPredicted RBP27.05■■□□□ 1.92
NEDD4L-237ENST00000617539 PDE3AQ14432 1141 aa27.05■■□□□ 1.92
NEDD4L-237ENST00000617539 MYPNQ86TC9 1320 aa27.05■■□□□ 1.92
NEDD4L-237ENST00000617539 RAB11FIP3O75154 756 aa27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 PRKCZQ05513 592 aa27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 SH3D19Q5HYK7 790 aa27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 CRACR2BQ8N4Y2 399 aaPredicted RBP27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 SMCR8Q8TEV9 937 aaPredicted RBP27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 RIOK1Q9BRS2 568 aaKnown RBP27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 WDR18Q9BV38 432 aa27.04■■□□□ 1.92
NEDD4L-237ENST00000617539 GDF11O95390 407 aa27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 IFIT2P09913 472 aaKnown RBP27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 FCGRTP55899 365 aa27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 PRPF38BQ5VTL8 546 aaKnown RBP27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 TMED8Q6PL24 325 aaPredicted RBP27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 CERS3Q8IU89 383 aa27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 GABRQQ9UN88 632 aa27.03■■□□□ 1.92
NEDD4L-237ENST00000617539 DOCK3Q8IZD9 2030 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 ASNSP08243 561 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 PDE6AP16499 860 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 HOXD10P28358 340 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 USP5P45974 858 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 EDC3Q96F86 508 aaKnown RBP27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 TMEM106CQ9BVX2 250 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 BCL11AQ9H165 835 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 CHMP4BQ9H444 224 aaKnown RBP27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 ZBTB21Q9ULJ3 1066 aa27.02■■□□□ 1.92
NEDD4L-237ENST00000617539 GOLIM4O00461 696 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms