RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 NBPF3Q9H094 633 aa17.77■□□□□ 0.43
GPN1-212ENST00000616939 MYO1AQ9UBC5 1043 aa17.77■□□□□ 0.43
GPN1-212ENST00000616939 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.43
GPN1-212ENST00000616939 ITIH6Q6UXX5 1313 aa17.76■□□□□ 0.43
GPN1-212ENST00000616939 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
GPN1-212ENST00000616939 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
GPN1-212ENST00000616939 KARSQ15046 597 aaKnown RBP17.76■□□□□ 0.43
GPN1-212ENST00000616939 STK11IPQ8N1F8 1099 aa17.76■□□□□ 0.43
GPN1-212ENST00000616939 FAM71BQ8TC56 605 aa17.76■□□□□ 0.43
GPN1-212ENST00000616939 TTF2Q9UNY4 1162 aaKnown RBP17.76■□□□□ 0.43
GPN1-212ENST00000616939 RRP15Q9Y3B9 282 aaKnown RBP17.76■□□□□ 0.43
GPN1-212ENST00000616939 APTXQ7Z2E3 356 aaKnown RBP17.75■□□□□ 0.43
GPN1-212ENST00000616939 NOSTRINQ8IVI9 506 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 DESI2Q9BSY9 194 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 ACBD3Q9H3P7 528 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 MKRN1Q9UHC7 482 aaKnown RBP17.75■□□□□ 0.43
GPN1-212ENST00000616939 MYH6P13533 1939 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 UBN2Q6ZU65 1347 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 MYH8P13535 1937 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 VGLL3A8MV65 326 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 ZBTB43O43298 467 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 FMNL1O95466 1100 aaPredicted RBP17.75■□□□□ 0.43
GPN1-212ENST00000616939 FKBP4Q02790 459 aaKnown RBP eCLIP17.75■□□□□ 0.43
GPN1-212ENST00000616939 RAD9BQ6WBX8 426 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 RAB11FIP4Q86YS3 637 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 CTAGE1Q96RT6 745 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.75■□□□□ 0.43
GPN1-212ENST00000616939 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
GPN1-212ENST00000616939 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
GPN1-212ENST00000616939 ARAP2Q8WZ64 1704 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 FOXN1O15353 648 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 ACTN4O43707 911 aaKnown RBP17.74■□□□□ 0.43
GPN1-212ENST00000616939 LIFRP42702 1097 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 RILPL1Q5EBL4 403 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 SPATA1Q5VX52 437 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
GPN1-212ENST00000616939 MED15Q96RN5 788 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
GPN1-212ENST00000616939 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
GPN1-212ENST00000616939 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 MED4Q9NPJ6 270 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 DOCK2Q92608 1830 aa17.74■□□□□ 0.43
GPN1-212ENST00000616939 CTAGE9A4FU28 777 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 GOLGA8AA7E2F4 631 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
GPN1-212ENST00000616939 MFAP3LO75121 409 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 ALX1Q15699 326 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
GPN1-212ENST00000616939 CDKAL1Q5VV42 579 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 CNGA4Q8IV77 575 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 VIPAS39Q9H9C1 493 aa17.73■□□□□ 0.43
GPN1-212ENST00000616939 FAM217BQ9NTX9 383 aaPredicted RBP17.73■□□□□ 0.43
GPN1-212ENST00000616939 SOWAHDA6NJG2 315 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 MMP1P03956 469 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 IFNAR1P17181 557 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 ADD2P35612 726 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 SAFBQ15424 915 aaKnown RBP eCLIP17.72■□□□□ 0.43
GPN1-212ENST00000616939 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 IGDCC4Q8TDY8 1250 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 PNKPQ96T60 521 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 LY9Q9HBG7 655 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 VPS18Q9P253 973 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 SRPRBQ9Y5M8 271 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 MYH13Q9UKX3 1938 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 ADORA1P30542 326 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 ZAP70P43403 619 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 MTF1Q14872 753 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 NBPF14Q5TI25 921 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 GOLGA6L1Q8N7Z2 621 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 NAPGQ99747 312 aaPredicted RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
GPN1-212ENST00000616939 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
GPN1-212ENST00000616939 TOB1P50616 345 aaPredicted RBP17.71■□□□□ 0.43
GPN1-212ENST00000616939 CUL4BQ13620 913 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 UBE3CQ15386 1083 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 TMTC1Q8IUR5 882 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 IGSF22Q8N9C0 903 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 PHKBQ93100 1093 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 PLA2G12BQ9BX93 195 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
GPN1-212ENST00000616939 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms