RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 IFIH1Q9BYX4 1025 aaKnown RBP21.03■□□□□ 0.96
SPAST-203ENST00000615843 NUTM2BA6NNL0 878 aaPredicted RBP21.02■□□□□ 0.96
SPAST-203ENST00000615843 NUTM2EB1AL46 878 aaPredicted RBP21.02■□□□□ 0.96
SPAST-203ENST00000615843 KBTBD3Q8NAB2 608 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 BANK1Q8NDB2 785 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 PHKBQ93100 1093 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 CFAP57Q96MR6 1250 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 SERTAD1Q9UHV2 236 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 TPCN1Q9ULQ1 816 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 C6orf229H3BNL8 230 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 MCUR1Q96AQ8 359 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 PLCB1Q9NQ66 1216 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 ATP1A2P50993 1020 aa21.02■□□□□ 0.96
SPAST-203ENST00000615843 CCDC97Q96F63 343 aaPredicted RBP21.02■□□□□ 0.96
SPAST-203ENST00000615843 ZNF131P52739 623 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 RPS6KA1Q15418 735 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 SMARCC2Q8TAQ2 1214 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 KLHDC4Q8TBB5 520 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 CACTINQ8WUQ7 758 aaKnown RBP21.01■□□□□ 0.95
SPAST-203ENST00000615843 ZSWIM6Q9HCJ5 1215 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 TNFAIP3P21580 790 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 OR8K1Q8NGG5 319 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 IL13P35225 146 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 CCT5P48643 541 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 GUCY2FP51841 1108 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 APPBP2Q92624 585 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 FAM204AQ9H8W3 233 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 CEP128Q6ZU80 1094 aa21.01■□□□□ 0.95
SPAST-203ENST00000615843 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
SPAST-203ENST00000615843 MAP7D1Q3KQU3 841 aa21■□□□□ 0.95
SPAST-203ENST00000615843 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
SPAST-203ENST00000615843 FCHSD1Q86WN1 690 aa21■□□□□ 0.95
SPAST-203ENST00000615843 TRIM58Q8NG06 486 aa21■□□□□ 0.95
SPAST-203ENST00000615843 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
SPAST-203ENST00000615843 FANCAO15360 1455 aa21■□□□□ 0.95
SPAST-203ENST00000615843 EPB41P11171 864 aaKnown RBP21■□□□□ 0.95
SPAST-203ENST00000615843 ZNF526Q8TF50 670 aaPredicted RBP21■□□□□ 0.95
SPAST-203ENST00000615843 TACO1Q9BSH4 297 aaKnown RBP21■□□□□ 0.95
SPAST-203ENST00000615843 MCM9Q9NXL9 1143 aa21■□□□□ 0.95
SPAST-203ENST00000615843 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
SPAST-203ENST00000615843 RBM6P78332 1123 aaKnown RBP21■□□□□ 0.95
SPAST-203ENST00000615843 GPIHBP1Q8IV16 184 aa21■□□□□ 0.95
SPAST-203ENST00000615843 UBL4BQ8N7F7 174 aa21■□□□□ 0.95
SPAST-203ENST00000615843 ABCC1P33527 1531 aa21■□□□□ 0.95
SPAST-203ENST00000615843 PTH1RQ03431 593 aa21■□□□□ 0.95
SPAST-203ENST00000615843 LONRF2Q1L5Z9 754 aa21■□□□□ 0.95
SPAST-203ENST00000615843 GKAP1Q5VSY0 366 aaPredicted RBP21■□□□□ 0.95
SPAST-203ENST00000615843 SRGAP1Q7Z6B7 1085 aa21■□□□□ 0.95
SPAST-203ENST00000615843 RNF10Q8N5U6 811 aaKnown RBP21■□□□□ 0.95
SPAST-203ENST00000615843 HELBQ8NG08 1087 aaPredicted RBP21■□□□□ 0.95
SPAST-203ENST00000615843 FANCLQ9NW38 375 aa21■□□□□ 0.95
SPAST-203ENST00000615843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21■□□□□ 0.95
SPAST-203ENST00000615843 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 USP19O94966 1318 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 CTNNA1P35221 906 aaKnown RBP20.99■□□□□ 0.95
SPAST-203ENST00000615843 VCX3BQ9H321 246 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 PLEKHA4Q9H4M7 779 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 EYA2O00167 538 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 GPAA1O43292 621 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 STX10O60499 249 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 SLC8A1P32418 973 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 TRAF1Q13077 416 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 UAP1Q16222 522 aaPredicted RBP20.99■□□□□ 0.95
SPAST-203ENST00000615843 CFAP157Q5JU67 520 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 TYW1BQ6NUM6 668 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.99■□□□□ 0.95
SPAST-203ENST00000615843 IMPG2Q9BZV3 1241 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.99■□□□□ 0.95
SPAST-203ENST00000615843 ERBB4Q15303 1308 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 PSMC4P43686 418 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 CCDC84Q86UT8 332 aaPredicted RBP20.99■□□□□ 0.95
SPAST-203ENST00000615843 STAMQ92783 540 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 HDAC9Q9UKV0 1011 aa20.99■□□□□ 0.95
SPAST-203ENST00000615843 EFCAB13Q8IY85 973 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 CDC23Q9UJX2 597 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 E7EWF7 191 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 MYL10Q9BUA6 226 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 HAUS4Q9H6D7 363 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 CMA1P23946 247 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 ZNF365Q70YC5 407 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 TRMT2AQ8IZ69 625 aaKnown RBP20.98■□□□□ 0.95
SPAST-203ENST00000615843 PCDHA7Q9UN72 937 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 HYOU1Q9Y4L1 999 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 A2MP01023 1474 aa20.98■□□□□ 0.95
SPAST-203ENST00000615843 KLHL30Q0D2K2 578 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 INF2Q27J81 1249 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 BLZF1Q9H2G9 400 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 STK38LQ9Y2H1 464 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 ERCC5P28715 1186 aaPredicted RBP20.97■□□□□ 0.95
SPAST-203ENST00000615843 DENND2CQ68D51 928 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 TXNDC16Q9P2K2 825 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 KCNJ14Q9UNX9 436 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 SPDYE3A6NKU9 549 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 ARHGAP24Q8N264 748 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 CETN3O15182 167 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 CCDC62Q6P9F0 684 aa20.97■□□□□ 0.95
SPAST-203ENST00000615843 NFATC2IPQ8NCF5 419 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms