RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 CYP7A1P22680 504 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 CCDC84Q86UT8 332 aaPredicted RBP20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 TGFBRAP1Q8WUH2 860 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 ARHGAP39Q9C0H5 1083 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 ANTXR1Q9H6X2 564 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 CPA4Q9UI42 421 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 AFG3L2Q9Y4W6 797 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 MYH7P12883 1935 aa20.5■□□□□ 0.87
SDCBP2-206ENST00000615838 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
SDCBP2-206ENST00000615838 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
SDCBP2-206ENST00000615838 GPAT2Q6NUI2 795 aa20.49■□□□□ 0.87
SDCBP2-206ENST00000615838 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
SDCBP2-206ENST00000615838 LOC285556D6RIA3 1793 aa20.49■□□□□ 0.87
SDCBP2-206ENST00000615838 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 LACTBP83111 547 aaPredicted RBP20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 C17orf99Q6UX52 265 aa20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 GADL1Q6ZQY3 521 aa20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 MAGEB6Q8N7X4 407 aa20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 CHMP4BQ9H444 224 aaKnown RBP20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 FLT1P17948 1338 aa20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
SDCBP2-206ENST00000615838 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 PDE3AQ14432 1141 aa20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 RRP1BQ14684 758 aaKnown RBP20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 ARHGEF6Q15052 776 aa20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
SDCBP2-206ENST00000615838 IGSF3O75054 1194 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 CYP2C8P10632 490 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 KIF22Q14807 665 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 DHX36Q9H2U1 1008 aaKnown RBP20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 SAP30BPQ9UHR5 308 aaKnown RBP20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 PTCH2Q9Y6C5 1203 aa20.46■□□□□ 0.87
SDCBP2-206ENST00000615838 IFIT2P09913 472 aaKnown RBP20.45■□□□□ 0.86
SDCBP2-206ENST00000615838 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
SDCBP2-206ENST00000615838 SLC4A8Q2Y0W8 1093 aa20.45■□□□□ 0.86
SDCBP2-206ENST00000615838 PARK7Q99497 189 aaKnown RBP20.45■□□□□ 0.86
SDCBP2-206ENST00000615838 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
SDCBP2-206ENST00000615838 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
SDCBP2-206ENST00000615838 CTGFP29279 349 aa20.44■□□□□ 0.86
SDCBP2-206ENST00000615838 CAP2P40123 477 aa20.44■□□□□ 0.86
SDCBP2-206ENST00000615838 ARMC5Q96C12 935 aa20.44■□□□□ 0.86
SDCBP2-206ENST00000615838 DNAJC18Q9H819 358 aa20.44■□□□□ 0.86
SDCBP2-206ENST00000615838 MYH8P13535 1937 aa20.43■□□□□ 0.86
SDCBP2-206ENST00000615838 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-206ENST00000615838 SPP2Q13103 211 aa20.43■□□□□ 0.86
SDCBP2-206ENST00000615838 DNAJC2Q99543 621 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-206ENST00000615838 DDX60LQ5H9U9 1706 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-206ENST00000615838 POTEFA5A3E0 1075 aa20.42■□□□□ 0.86
SDCBP2-206ENST00000615838 PSMC4P43686 418 aa20.42■□□□□ 0.86
SDCBP2-206ENST00000615838 CRACR2BQ8N4Y2 399 aaPredicted RBP20.42■□□□□ 0.86
SDCBP2-206ENST00000615838 TRIM47Q96LD4 638 aa20.42■□□□□ 0.86
SDCBP2-206ENST00000615838 TRIM34Q9BYJ4 488 aa20.42■□□□□ 0.86
SDCBP2-206ENST00000615838 USP17L5A8MUK1 530 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 GOLIM4O00461 696 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 BCRP11274 1271 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 USP5P45974 858 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 JAG1P78504 1218 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 TTF1Q15361 905 aaPredicted RBP20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 SHROOM1Q2M3G4 852 aaPredicted RBP20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 TREML2Q5T2D2 321 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 METTL16Q86W50 562 aaKnown RBP20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 FOXP4Q8IVH2 680 aaPredicted RBP20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 ZNF280CQ8ND82 737 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 EDC3Q96F86 508 aaKnown RBP20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 AGTPBP1Q9UPW5 1226 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 SLC45A1Q9Y2W3 748 aa20.41■□□□□ 0.86
SDCBP2-206ENST00000615838 GNRH1P01148 92 aa20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 PDE6AP16499 860 aa20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 HMGCS2P54868 508 aa20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 CERS3Q8IU89 383 aa20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.4■□□□□ 0.86
SDCBP2-206ENST00000615838 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 GDF11O95390 407 aa20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 FMNL1O95466 1100 aaPredicted RBP20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 HLA-DOAP06340 250 aa20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 ZNF333Q96JL9 665 aa20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 RIOK1Q9BRS2 568 aaKnown RBP20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
SDCBP2-206ENST00000615838 MAGEB6P1A0A0J9YX57 407 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 ASNSP08243 561 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 OSBPP22059 807 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 NBPF11Q86T75 865 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 PROCA1Q8NCQ7 364 aaPredicted RBP20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 SMCR8Q8TEV9 937 aaPredicted RBP20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 SH3TC2Q8TF17 1288 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
SDCBP2-206ENST00000615838 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
SDCBP2-206ENST00000615838 MYCP01106 439 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms