RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 POSTNQ15063 836 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 GFM2Q969S9 779 aaKnown RBP15.27■□□□□ 0.04
CHD1-212ENST00000614616 NUTM2BA6NNL0 878 aaPredicted RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 NUTM2EB1AL46 878 aaPredicted RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.03
CHD1-212ENST00000614616 RPS6KB1P23443 525 aa15.27■□□□□ 0.03
CHD1-212ENST00000614616 EPHB4P54760 987 aa15.27■□□□□ 0.03
CHD1-212ENST00000614616 ADKP55263 362 aaKnown RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 NLRP6P59044 892 aa15.27■□□□□ 0.03
CHD1-212ENST00000614616 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 ERMNQ8TAM6 284 aa15.27■□□□□ 0.03
CHD1-212ENST00000614616 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.03
CHD1-212ENST00000614616 RWDD2BP57060 319 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 RNASE9P60153 205 aaKnown RBP15.26■□□□□ 0.03
CHD1-212ENST00000614616 MCM10Q7L590 875 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 KCNH3Q9ULD8 1083 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 PAK1Q13153 545 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 P3H4Q92791 437 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 INSRP06213 1382 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 SERPINB6P35237 376 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 CALML3P27482 149 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 ITIH3Q06033 890 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 DISP3Q9P2K9 1392 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 CCDC169A6NNP5 214 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 KRT9P35527 623 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 CUL5Q93034 780 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 ASIC2Q16515 512 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 MIS12Q9H081 205 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
CHD1-212ENST00000614616 HNRNPCP07910 306 aaKnown RBP eCLIP15.25■□□□□ 0.031e-5■■■□□ 15.5
CHD1-212ENST00000614616 ATP2A3Q93084 1043 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
CHD1-212ENST00000614616 LRRC2Q9BYS8 371 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 KIF20BQ96Q89 1820 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 HMGB1P1B2RPK0 211 aaPredicted RBP15.25■□□□□ 0.03
CHD1-212ENST00000614616 CUTAO60888 179 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 GRAMD4Q6IC98 578 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 TUBB6Q9BUF5 446 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 EPS15L1Q9UBC2 864 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 DHX32Q7L7V1 743 aaKnown RBP15.25■□□□□ 0.03
CHD1-212ENST00000614616 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 MAK16Q9BXY0 300 aaKnown RBP15.25■□□□□ 0.03
CHD1-212ENST00000614616 ARHGAP42A6NI28 874 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 PPP4R1Q8TF05 950 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 NRBF2Q96F24 287 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 KIAA1468Q9P260 1216 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 STX10O60499 249 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 DTHD1Q6ZMT9 781 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 AOX1Q06278 1338 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 ANO1Q5XXA6 986 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
CHD1-212ENST00000614616 KRT15P19012 456 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 MCM7P33993 719 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 VPS41P49754 854 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
CHD1-212ENST00000614616 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
CHD1-212ENST00000614616 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 GCFC2P16383 781 aaKnown RBP15.24■□□□□ 0.03
CHD1-212ENST00000614616 LGSNQ5TDP6 509 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 SRLQ86TD4 932 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 ARHGAP18Q8N392 663 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 CABP1Q9NZU7 370 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 ERBB4Q15303 1308 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 CASP8Q14790 479 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 KCTD16Q68DU8 428 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 CHCHD3Q9NX63 227 aaKnown RBP15.24■□□□□ 0.03
CHD1-212ENST00000614616 KLHL7Q8IXQ5 586 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 HYOU1Q9Y4L1 999 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 HAND2P61296 217 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 CCDC13Q8IYE1 715 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
CHD1-212ENST00000614616 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 YIPF3Q9GZM5 350 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 LMNB2Q03252 620 aa15.24■□□□□ 0.03
CHD1-212ENST00000614616 RTL9Q8NET4 1388 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 PDE4BQ07343 736 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 PARP9Q8IXQ6 854 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 JPH4Q96JJ6 628 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 INTS9Q9NV88 658 aaKnown RBP15.23■□□□□ 0.03
CHD1-212ENST00000614616 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 TCP1P17987 556 aaKnown RBP15.23■□□□□ 0.03
CHD1-212ENST00000614616 PSMD6Q15008 389 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 PHEXP78562 749 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 LRRC43Q8N309 656 aa15.23■□□□□ 0.03
CHD1-212ENST00000614616 TEX9Q8N6V9 391 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms