RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SSBP05455 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH5-208ENST00000614547 SHC4Q6S5L8 630 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH5-208ENST00000614547 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 STX10O60499 249 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 ZPR1O75312 459 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 CASP8Q14790 479 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 MAP9Q49MG5 647 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 XAGE2Q96GT9 111 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
CDH5-208ENST00000614547 CCDC151A5D8V7 595 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 EBAG9O00559 213 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 HOXB7P09629 217 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 RTN1Q16799 776 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 TTLL7Q6ZT98 887 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
CDH5-208ENST00000614547 BRMS1Q9HCU9 246 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 IKBKBO14920 756 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 CUTAO60888 179 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDH5-208ENST00000614547 TANGO6Q9C0B7 1094 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
CDH5-208ENST00000614547 JRKLQ9Y4A0 524 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 EYA2O00167 538 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
CDH5-208ENST00000614547 VSNL1P62760 191 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 FAM182BQ5T319 152 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
CDH5-208ENST00000614547 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
CDH5-208ENST00000614547 ARHGEF28Q8N1W1 1705 aaKnown RBP13.34□□□□□ -0.27
CDH5-208ENST00000614547 EIF3CLB5ME19 914 aaKnown RBP13.33□□□□□ -0.27
CDH5-208ENST00000614547 RNF40O75150 1001 aa13.33□□□□□ -0.27
CDH5-208ENST00000614547 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.27
CDH5-208ENST00000614547 EIF3CQ99613 913 aaKnown RBP13.33□□□□□ -0.27
CDH5-208ENST00000614547 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.27
CDH5-208ENST00000614547 MRFAP1Q9Y605 127 aa13.33□□□□□ -0.27
CDH5-208ENST00000614547 PRDM1O75626 825 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 NCAPHQ15003 741 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDH5-208ENST00000614547 SRLQ86TD4 932 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 ADAMTS13Q76LX8 1427 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 MED23Q9ULK4 1368 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 GRIN1Q05586 938 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 STIM1Q13586 685 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
CDH5-208ENST00000614547 METTL16Q86W50 562 aaKnown RBP13.33□□□□□ -0.28
CDH5-208ENST00000614547 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
CDH5-208ENST00000614547 CDC27P30260 824 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 WTAPQ15007 396 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 MFSD6Q6ZSS7 791 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 FAM76AQ8TAV0 307 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 WASF1Q92558 559 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 KCNB2Q92953 911 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 TRIM75PA6NK02 468 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 IFT81Q8WYA0 676 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 PNKPQ96T60 521 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 AKAP2Q9Y2D5 859 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 GOLGA6CA6NDK9 693 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 GOLGA6DP0CG33 693 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 KCTD16Q68DU8 428 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 GOLGA6AQ9NYA3 693 aa13.32□□□□□ -0.28
CDH5-208ENST00000614547 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MARCH6O60337 910 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MCM7P33993 719 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 KCNQ4P56696 695 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
CDH5-208ENST00000614547 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MTIF2P46199 727 aaKnown RBP13.31□□□□□ -0.28
CDH5-208ENST00000614547 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 EPSTI1Q96J88 318 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 MYO6Q9UM54 1294 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 PCDHB6Q9Y5E3 794 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 IDEP14735 1019 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 SPA17Q15506 151 aa13.31□□□□□ -0.28
CDH5-208ENST00000614547 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms