RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.33□□□□□ -1.4
SYNRG-220ENST00000614000 ANKRD65E5RJM6 399 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 SYT1P21579 422 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 OAS2P29728 719 aaKnown RBP6.33□□□□□ -1.4
SYNRG-220ENST00000614000 TERF1P54274 439 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 UBASH3AP57075 661 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 FKBP1AP62942 108 aaKnown RBP6.33□□□□□ -1.4
SYNRG-220ENST00000614000 SMC1AQ14683 1233 aaKnown RBP6.33□□□□□ -1.4
SYNRG-220ENST00000614000 CCDC121Q6ZUS5 278 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 VGLL2Q8N8G2 317 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 PPM1EQ8WY54 764 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 ERO1AQ96HE7 468 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 PPP1R12CQ9BZL4 782 aa6.33□□□□□ -1.4
SYNRG-220ENST00000614000 MED23Q9ULK4 1368 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 NAV1Q8NEY1 1877 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 POTEB2H3BUK9 544 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 GRM8O00222 908 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 POLR3DP05423 398 aaPredicted RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 INPP5BP32019 993 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 GCKP35557 465 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 LIG3P49916 1009 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 STIM1Q13586 685 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 AACSQ86V21 672 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 SMC5Q8IY18 1101 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 MICAL1Q8TDZ2 1067 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 GOLGA1Q92805 767 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 PI4KAP2A4QPH2 592 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 NDUFAB1O14561 156 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 ZSCAN22P10073 491 aaPredicted RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 MCM3P25205 808 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 ERCC6LQ2NKX8 1250 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 LRCH2Q5VUJ6 765 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 PI4KAP1Q8N8J0 262 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 CCDC150Q8NCX0 1101 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 GDAP1L1Q96MZ0 367 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 ZNF215Q9UL58 517 aaPredicted RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 CEP83Q9Y592 693 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 MYO5AQ9Y4I1 1855 aaKnown RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 GSTTP1A0A1W2PQM5 241 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 CTSWP56202 376 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 ST5P78524 1137 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 R3HDM1Q15032 1099 aaKnown RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 TDRD12Q587J7 1177 aaKnown RBP6.32□□□□□ -1.4
SYNRG-220ENST00000614000 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 MASTLQ96GX5 879 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 SETDB2Q96T68 719 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 SRCIN1Q9C0H9 1055 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 COPRSQ9NQ92 184 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 PARP3Q9Y6F1 533 aa6.32□□□□□ -1.4
SYNRG-220ENST00000614000 HOXD11P31277 338 aaPredicted RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 LRMPQ12912 555 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 SPECC1LQ69YQ0 1117 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 RSRC1Q96IZ7 334 aaKnown RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 RFX7Q2KHR2 1363 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 MYO1BO43795 1136 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 HSF2BPO75031 334 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 KRT18P05783 430 aaKnown RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 POLD1P28340 1107 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 DIXDC1Q155Q3 683 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 CEP112Q8N8E3 955 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 CNNM3Q8NE01 707 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 IFNKQ9P0W0 207 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 MACROD2A1Z1Q3 448 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 F6X3S4 739 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 CTAGE5O15320 804 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 PRPF4BQ13523 1007 aaKnown RBP6.31□□□□□ -1.4
SYNRG-220ENST00000614000 FAM173BQ6P4H8 233 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 UBAC1Q9BSL1 405 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 TMEM63CQ9P1W3 806 aa6.31□□□□□ -1.4
SYNRG-220ENST00000614000 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 SMIM23A6NLE4 172 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 TMCO5BA8MYB1 307 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 MMP10P09238 476 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 GRAPQ13588 217 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 SYCP1Q15431 976 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 CPLX4Q7Z7G2 160 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 SP8Q8IXZ3 490 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 TRIM22Q8IYM9 498 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 TTLL11Q8NHH1 800 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 GRAPLQ8TC17 118 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 CCDC43Q96MW1 224 aaKnown RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 PHIPQ8WWQ0 1821 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 OTOFQ9HC10 1997 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 HIP1O00291 1037 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 SDSP20132 328 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
SYNRG-220ENST00000614000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.3□□□□□ -1.4
SYNRG-220ENST00000614000 C8orf76Q96K31 380 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms