RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CERS3Q8IU89 383 aa27.72■■■□□ 2.03
FAM228B-208ENST00000613899 PI4KBQ9UBF8 816 aa27.72■■■□□ 2.03
FAM228B-208ENST00000613899 FLT1P17948 1338 aa27.71■■■□□ 2.03
FAM228B-208ENST00000613899 CYP7A1P22680 504 aa27.71■■■□□ 2.03
FAM228B-208ENST00000613899 PDE3AQ14432 1141 aa27.71■■■□□ 2.03
FAM228B-208ENST00000613899 TGFBRAP1Q8WUH2 860 aa27.71■■■□□ 2.03
FAM228B-208ENST00000613899 ZSWIM8A7E2V4 1837 aa27.71■■■□□ 2.03
FAM228B-208ENST00000613899 ADGRA2Q96PE1 1338 aa27.7■■■□□ 2.03
FAM228B-208ENST00000613899 GNRH1P01148 92 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 MAP3K12Q12852 859 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 GPAT2Q6NUI2 795 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 MAPKAPK5Q8IW41 473 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 TBC1D2Q9BYX2 928 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 CPA4Q9UI42 421 aa27.7■■■□□ 2.02
FAM228B-208ENST00000613899 RBBP6Q7Z6E9 1792 aaKnown RBP27.7■■■□□ 2.02
FAM228B-208ENST00000613899 RAB11FIP3O75154 756 aa27.69■■■□□ 2.02
FAM228B-208ENST00000613899 GADL1Q6ZQY3 521 aa27.69■■■□□ 2.02
FAM228B-208ENST00000613899 ARMC5Q96C12 935 aa27.69■■■□□ 2.02
FAM228B-208ENST00000613899 SLC45A1Q9Y2W3 748 aa27.69■■■□□ 2.02
FAM228B-208ENST00000613899 TRIM75PA6NK02 468 aa27.68■■■□□ 2.02
FAM228B-208ENST00000613899 APBB1O00213 710 aa27.68■■■□□ 2.02
FAM228B-208ENST00000613899 TTF1Q15361 905 aaPredicted RBP27.68■■■□□ 2.02
FAM228B-208ENST00000613899 MAGEB6Q8N7X4 407 aa27.68■■■□□ 2.02
FAM228B-208ENST00000613899 ARHGAP39Q9C0H5 1083 aa27.68■■■□□ 2.02
FAM228B-208ENST00000613899 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.68■■■□□ 2.02
FAM228B-208ENST00000613899 NDUFB9Q9Y6M9 179 aa27.68■■■□□ 2.02
FAM228B-208ENST00000613899 IFIT2P09913 472 aaKnown RBP27.67■■■□□ 2.02
FAM228B-208ENST00000613899 CAP2P40123 477 aa27.67■■■□□ 2.02
FAM228B-208ENST00000613899 ANTXR1Q9H6X2 564 aa27.67■■■□□ 2.02
FAM228B-208ENST00000613899 PTCH2Q9Y6C5 1203 aa27.67■■■□□ 2.02
FAM228B-208ENST00000613899 LOC285556D6RIA3 1793 aa27.66■■■□□ 2.02
FAM228B-208ENST00000613899 TNRC18O15417 2968 aaPredicted RBP27.66■■■□□ 2.02
FAM228B-208ENST00000613899 PRMT2P55345 433 aa27.66■■■□□ 2.02
FAM228B-208ENST00000613899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.66■■■□□ 2.02
FAM228B-208ENST00000613899 TRIM34Q9BYJ4 488 aa27.66■■■□□ 2.02
FAM228B-208ENST00000613899 MYH1P12882 1939 aa27.66■■■□□ 2.02
FAM228B-208ENST00000613899 HLA-DOAP06340 250 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 CYP2C8P10632 490 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 DYNLL1P63167 89 aaKnown RBP27.65■■■□□ 2.02
FAM228B-208ENST00000613899 SLC9C1Q4G0N8 1177 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 C20orf194Q5TEA3 1177 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 CCDC84Q86UT8 332 aaPredicted RBP27.65■■■□□ 2.02
FAM228B-208ENST00000613899 CRACR2BQ8N4Y2 399 aaPredicted RBP27.65■■■□□ 2.02
FAM228B-208ENST00000613899 MIGA1Q8NAN2 632 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 PDE4DIPQ5VU43 2346 aa27.65■■■□□ 2.02
FAM228B-208ENST00000613899 NBPF11Q86T75 865 aa27.64■■■□□ 2.02
FAM228B-208ENST00000613899 METTL16Q86W50 562 aaKnown RBP27.64■■■□□ 2.02
FAM228B-208ENST00000613899 FOXP4Q8IVH2 680 aaPredicted RBP27.64■■■□□ 2.02
FAM228B-208ENST00000613899 PROCA1Q8NCQ7 364 aaPredicted RBP27.64■■■□□ 2.02
FAM228B-208ENST00000613899 ZNF280CQ8ND82 737 aa27.64■■■□□ 2.02
FAM228B-208ENST00000613899 AGTPBP1Q9UPW5 1226 aa27.64■■■□□ 2.02
FAM228B-208ENST00000613899 USP17L5A8MUK1 530 aa27.63■■■□□ 2.01
FAM228B-208ENST00000613899 BCRP11274 1271 aa27.63■■■□□ 2.01
FAM228B-208ENST00000613899 AS3MTQ9HBK9 375 aa27.63■■■□□ 2.01
FAM228B-208ENST00000613899 PALD1Q9ULE6 856 aa27.63■■■□□ 2.01
FAM228B-208ENST00000613899 CENPFP49454 3210 aa27.63■■■□□ 2.01
FAM228B-208ENST00000613899 MGAMO43451 1857 aa27.62■■■□□ 2.01
FAM228B-208ENST00000613899 ASNSP08243 561 aa27.62■■■□□ 2.01
FAM228B-208ENST00000613899 PSMC4P43686 418 aa27.62■■■□□ 2.01
FAM228B-208ENST00000613899 USP5P45974 858 aa27.62■■■□□ 2.01
FAM228B-208ENST00000613899 RRP1BQ14684 758 aaKnown RBP27.62■■■□□ 2.01
FAM228B-208ENST00000613899 ZNF333Q96JL9 665 aa27.62■■■□□ 2.01
FAM228B-208ENST00000613899 HOXD10P28358 340 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 SPP2Q13103 211 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 SMCR8Q8TEV9 937 aaPredicted RBP27.61■■■□□ 2.01
FAM228B-208ENST00000613899 TRIM47Q96LD4 638 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 DNAJC18Q9H819 358 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 GINM1Q9NU53 330 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 SAP30BPQ9UHR5 308 aaKnown RBP27.61■■■□□ 2.01
FAM228B-208ENST00000613899 PNMA3Q9UL41 463 aa27.61■■■□□ 2.01
FAM228B-208ENST00000613899 KIAA0100Q14667 2235 aaKnown RBP27.6■■■□□ 2.01
FAM228B-208ENST00000613899 FMNL1O95466 1100 aaPredicted RBP27.6■■■□□ 2.01
FAM228B-208ENST00000613899 DNAJC2Q99543 621 aaKnown RBP27.6■■■□□ 2.01
FAM228B-208ENST00000613899 SRRDQ9UH36 339 aa27.6■■■□□ 2.01
FAM228B-208ENST00000613899 DDX60LQ5H9U9 1706 aaKnown RBP27.59■■■□□ 2.01
FAM228B-208ENST00000613899 CTGFP29279 349 aa27.59■■■□□ 2.01
FAM228B-208ENST00000613899 FCGRTP55899 365 aa27.59■■■□□ 2.01
FAM228B-208ENST00000613899 BCL11AQ9H165 835 aa27.59■■■□□ 2.01
FAM228B-208ENST00000613899 NAV1Q8NEY1 1877 aa27.59■■■□□ 2.01
FAM228B-208ENST00000613899 POTEFA5A3E0 1075 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 GOLIM4O00461 696 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 ECM2O94769 699 aaPredicted RBP27.58■■■□□ 2.01
FAM228B-208ENST00000613899 PDE6AP16499 860 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 HMGCS2P54868 508 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 PABPC4Q13310 644 aaKnown RBP eCLIP27.58■■■□□ 2.01
FAM228B-208ENST00000613899 TREML2Q5T2D2 321 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 SLC9C2Q5TAH2 1124 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 TMEM106CQ9BVX2 250 aa27.58■■■□□ 2.01
FAM228B-208ENST00000613899 OSBPP22059 807 aa27.57■■■□□ 2
FAM228B-208ENST00000613899 SH3D19Q5HYK7 790 aa27.57■■■□□ 2
FAM228B-208ENST00000613899 RIOK1Q9BRS2 568 aaKnown RBP27.57■■■□□ 2
FAM228B-208ENST00000613899 WDR18Q9BV38 432 aa27.57■■■□□ 2
FAM228B-208ENST00000613899 LRRCC1Q9C099 1032 aa27.57■■■□□ 2
FAM228B-208ENST00000613899 MYPNQ86TC9 1320 aa27.57■■■□□ 2
FAM228B-208ENST00000613899 MAGEB6P1A0A0J9YX57 407 aa27.56■■■□□ 2
FAM228B-208ENST00000613899 SLC4A8Q2Y0W8 1093 aa27.56■■■□□ 2
FAM228B-208ENST00000613899 EHD4Q9H223 541 aa27.56■■■□□ 2
FAM228B-208ENST00000613899 GDF11O95390 407 aa27.55■■■□□ 2
FAM228B-208ENST00000613899 ATP5JP18859 108 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms