RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 TCP10Q12799 353 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 VEZTQ9HBM0 779 aa23.11■■□□□ 1.29
SRRM3-205ENST00000612155 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
SRRM3-205ENST00000612155 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 LRRC2Q9BYS8 371 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 WDHD1O75717 1129 aaPredicted RBP23.1■■□□□ 1.29
SRRM3-205ENST00000612155 USP5P45974 858 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 Q6ZUG5 572 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 ZFPM1Q8IX07 1006 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 STK11IPQ8N1F8 1099 aa23.1■■□□□ 1.29
SRRM3-205ENST00000612155 ZBED3Q96IU2 234 aaPredicted RBP23.1■■□□□ 1.29
SRRM3-205ENST00000612155 CRNKL1Q9BZJ0 848 aaKnown RBP23.1■■□□□ 1.29
SRRM3-205ENST00000612155 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
SRRM3-205ENST00000612155 BAZ2AQ9UIF9 1905 aaKnown RBP23.09■■□□□ 1.29
SRRM3-205ENST00000612155 CDK5RAP2Q96SN8 1893 aa23.09■■□□□ 1.29
SRRM3-205ENST00000612155 CYP2D7A0A087X1C5 515 aa23.09■■□□□ 1.29
SRRM3-205ENST00000612155 TCP10L2B9ZVM9 353 aa23.09■■□□□ 1.29
SRRM3-205ENST00000612155 GADD45BO75293 160 aaPredicted RBP23.09■■□□□ 1.29
SRRM3-205ENST00000612155 MRE11P49959 708 aa23.09■■□□□ 1.29
SRRM3-205ENST00000612155 ZSCAN23Q3MJ62 389 aa23.09■■□□□ 1.29
SRRM3-205ENST00000612155 F13A1P00488 732 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 L3MBTL3Q96JM7 780 aaPredicted RBP23.08■■□□□ 1.29
SRRM3-205ENST00000612155 TMEM63CQ9P1W3 806 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 ZNF70Q9UC06 446 aaPredicted RBP23.08■■□□□ 1.29
SRRM3-205ENST00000612155 PATL2C9JE40 543 aaKnown RBP23.08■■□□□ 1.29
SRRM3-205ENST00000612155 FGAP02671 866 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 STK3Q13188 491 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 IFNL3Q8IZI9 196 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 RRAGCQ9HB90 399 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 HACL1Q9UJ83 578 aa23.08■■□□□ 1.29
SRRM3-205ENST00000612155 HAND2P61296 217 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 USP48Q86UV5 1035 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
SRRM3-205ENST00000612155 ISY1Q9ULR0 285 aaKnown RBP23.07■■□□□ 1.28
SRRM3-205ENST00000612155 E7EWF7 191 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 IGSF3O75054 1194 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 SLURP2P0DP57 97 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 ZNF445P59923 1031 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 EXOSC10Q01780 885 aaKnown RBP23.07■■□□□ 1.28
SRRM3-205ENST00000612155 MTMR14Q8NCE2 650 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 CNPY2Q9Y2B0 182 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 FLT1P17948 1338 aa23.07■■□□□ 1.28
SRRM3-205ENST00000612155 POTEIP0CG38 1075 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 POTEJP0CG39 1038 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 CYP2D6P10635 497 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 EPHX2P34913 555 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 TDO2P48775 406 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 EAPPQ56P03 285 aaPredicted RBP23.06■■□□□ 1.28
SRRM3-205ENST00000612155 DLK2Q6UY11 383 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 NMRK2Q9NPI5 230 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 ADARB2Q9NS39 739 aaKnown RBP23.06■■□□□ 1.28
SRRM3-205ENST00000612155 FAM198AQ9UFP1 575 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 ECM29Q5VYK3 1845 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 SPDYE2Q495Y8 402 aa23.06■■□□□ 1.28
SRRM3-205ENST00000612155 TMED8Q6PL24 325 aaPredicted RBP23.06■■□□□ 1.28
SRRM3-205ENST00000612155 PLCG2P16885 1265 aa23.05■■□□□ 1.28
SRRM3-205ENST00000612155 ANGEL2Q5VTE6 544 aaKnown RBP23.05■■□□□ 1.28
SRRM3-205ENST00000612155 DHX32Q7L7V1 743 aaKnown RBP23.05■■□□□ 1.28
SRRM3-205ENST00000612155 CDAN1Q8IWY9 1227 aa23.05■■□□□ 1.28
SRRM3-205ENST00000612155 NAPBQ9H115 298 aa23.05■■□□□ 1.28
SRRM3-205ENST00000612155 MCM9Q9NXL9 1143 aa23.05■■□□□ 1.28
SRRM3-205ENST00000612155 GNAT2P19087 354 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 TMEM87AQ8NBN3 555 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 BRF1Q92994 677 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 GTF3C6Q969F1 213 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
SRRM3-205ENST00000612155 MINDY4BA8MYZ0 360 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 USP17L12C9JPN9 530 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 USP17L21D6R901 530 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 MYO1BO43795 1136 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 JAK2O60674 1132 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 TAF1DQ9H5J8 278 aaPredicted RBP23.04■■□□□ 1.28
SRRM3-205ENST00000612155 GGA3Q9NZ52 723 aa23.04■■□□□ 1.28
SRRM3-205ENST00000612155 INCENPQ9NQS7 918 aa23.03■■□□□ 1.28
SRRM3-205ENST00000612155 PRAMEF18Q5VWM3 479 aa23.03■■□□□ 1.28
SRRM3-205ENST00000612155 CTR9Q6PD62 1173 aa23.03■■□□□ 1.28
SRRM3-205ENST00000612155 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 CDC37L1Q7L3B6 337 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 AGXT2Q9BYV1 514 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 TMEM39BQ9GZU3 492 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 POLR2AP24928 1970 aaKnown RBP23.02■■□□□ 1.28
SRRM3-205ENST00000612155 WDR90Q96KV7 1748 aa23.02■■□□□ 1.28
SRRM3-205ENST00000612155 PLCD1P51178 756 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 LARP1BQ659C4 914 aaKnown RBP23.01■■□□□ 1.27
SRRM3-205ENST00000612155 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 NACAP1Q9BZK3 213 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 TMOD2Q9NZR1 351 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 CNTNAP1P78357 1384 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 VPS37CA5D8V6 355 aaPredicted RBP23.01■■□□□ 1.27
SRRM3-205ENST00000612155 DDTLA6NHG4 134 aaPredicted RBP23.01■■□□□ 1.27
SRRM3-205ENST00000612155 HMGB1P09429 215 aaKnown RBP23.01■■□□□ 1.27
SRRM3-205ENST00000612155 SCRN1Q12765 414 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 SH3BP5LQ7L8J4 393 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 OSBPL5Q9H0X9 879 aaPredicted RBP23.01■■□□□ 1.27
SRRM3-205ENST00000612155 NAV1Q8NEY1 1877 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 FOCADQ5VW36 1801 aa23.01■■□□□ 1.27
SRRM3-205ENST00000612155 MBD3O95983 291 aa23■■□□□ 1.27
SRRM3-205ENST00000612155 DNM1Q05193 864 aaKnown RBP23■■□□□ 1.27
SRRM3-205ENST00000612155 APOBRQ0VD83 1088 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms