RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
LINC00116-203ENST00000611969 PICALMQ13492 652 aa17.15■□□□□ 0.34
LINC00116-203ENST00000611969 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
LINC00116-203ENST00000611969 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
LINC00116-203ENST00000611969 SPTBN5Q9NRC6 3674 aaKnown RBP17.14■□□□□ 0.33
LINC00116-203ENST00000611969 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
LINC00116-203ENST00000611969 PHKA1P46020 1223 aa17.14■□□□□ 0.33
LINC00116-203ENST00000611969 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
LINC00116-203ENST00000611969 MAP3K21Q5TCX8 1036 aa17.14■□□□□ 0.33
LINC00116-203ENST00000611969 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
LINC00116-203ENST00000611969 PEX10O60683 326 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 COL6A1P12109 1028 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
LINC00116-203ENST00000611969 HMGCS2P54868 508 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 LRRC26Q2I0M4 334 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 PROCA1Q8NCQ7 364 aaPredicted RBP17.13■□□□□ 0.33
LINC00116-203ENST00000611969 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
LINC00116-203ENST00000611969 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
LINC00116-203ENST00000611969 SPP2Q13103 211 aa17.12■□□□□ 0.33
LINC00116-203ENST00000611969 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
LINC00116-203ENST00000611969 SIL1Q9H173 461 aa17.12■□□□□ 0.33
LINC00116-203ENST00000611969 ASCC2Q9H1I8 757 aaPredicted RBP17.12■□□□□ 0.33
LINC00116-203ENST00000611969 CYP2B6P20813 491 aa17.11■□□□□ 0.33
LINC00116-203ENST00000611969 ADORA1P30542 326 aa17.11■□□□□ 0.33
LINC00116-203ENST00000611969 BTDP43251 543 aa17.11■□□□□ 0.33
LINC00116-203ENST00000611969 RRP1BQ14684 758 aaKnown RBP17.11■□□□□ 0.33
LINC00116-203ENST00000611969 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
LINC00116-203ENST00000611969 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 SLFN5Q08AF3 891 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
LINC00116-203ENST00000611969 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 FOCADQ5VW36 1801 aa17.1■□□□□ 0.33
LINC00116-203ENST00000611969 SEMA3EO15041 775 aa17.09■□□□□ 0.33
LINC00116-203ENST00000611969 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
LINC00116-203ENST00000611969 RHBDL3P58872 404 aa17.09■□□□□ 0.33
LINC00116-203ENST00000611969 RASGRF1Q13972 1273 aa17.09■□□□□ 0.33
LINC00116-203ENST00000611969 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
LINC00116-203ENST00000611969 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
LINC00116-203ENST00000611969 PTPRCP08575 1304 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 TBC1D12O60347 775 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 CACNB2Q08289 660 aaPredicted RBP17.08■□□□□ 0.32
LINC00116-203ENST00000611969 FAM109BQ6ICB4 259 aaPredicted RBP17.08■□□□□ 0.32
LINC00116-203ENST00000611969 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
LINC00116-203ENST00000611969 ZNF384Q8TF68 577 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00116-203ENST00000611969 ABCF2Q9UG63 623 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 CDH23Q9H251 3354 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 RLFQ13129 1914 aa17.08■□□□□ 0.32
LINC00116-203ENST00000611969 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
LINC00116-203ENST00000611969 CCL14Q16627 93 aa17.07■□□□□ 0.32
LINC00116-203ENST00000611969 ALDH1L2Q3SY69 923 aa17.07■□□□□ 0.32
LINC00116-203ENST00000611969 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
LINC00116-203ENST00000611969 LHX8Q68G74 356 aa17.07■□□□□ 0.32
LINC00116-203ENST00000611969 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
LINC00116-203ENST00000611969 CIAO1O76071 339 aa17.06■□□□□ 0.32
LINC00116-203ENST00000611969 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
LINC00116-203ENST00000611969 PABPC4Q13310 644 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00116-203ENST00000611969 MTMR2Q13614 643 aa17.06■□□□□ 0.32
LINC00116-203ENST00000611969 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
LINC00116-203ENST00000611969 TRMT2AQ8IZ69 625 aaKnown RBP17.06■□□□□ 0.32
LINC00116-203ENST00000611969 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
LINC00116-203ENST00000611969 SOCS4Q8WXH5 440 aa17.06■□□□□ 0.32
LINC00116-203ENST00000611969 FAM163AQ96GL9 167 aaPredicted RBP17.06■□□□□ 0.32
LINC00116-203ENST00000611969 CEP126Q9P2H0 1117 aa17.06■□□□□ 0.32
LINC00116-203ENST00000611969 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
LINC00116-203ENST00000611969 XRCC5P13010 732 aaKnown RBP17.05■□□□□ 0.32
LINC00116-203ENST00000611969 CAP2P40123 477 aa17.05■□□□□ 0.32
LINC00116-203ENST00000611969 MECOMQ03112 1051 aa17.05■□□□□ 0.32
LINC00116-203ENST00000611969 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
LINC00116-203ENST00000611969 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
LINC00116-203ENST00000611969 PDS5AQ29RF7 1337 aaKnown RBP17.04■□□□□ 0.32
LINC00116-203ENST00000611969 USP17L5A8MUK1 530 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 IRX3P78415 501 aaPredicted RBP17.04■□□□□ 0.32
LINC00116-203ENST00000611969 JAG1P78504 1218 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 USP6NLQ92738 828 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
LINC00116-203ENST00000611969 PORCNQ9H237 461 aa17.04■□□□□ 0.32
LINC00116-203ENST00000611969 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
LINC00116-203ENST00000611969 ZBTB22O15209 634 aa17.03■□□□□ 0.32
LINC00116-203ENST00000611969 HERVK_113P62684 666 aa17.03■□□□□ 0.32
LINC00116-203ENST00000611969 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
LINC00116-203ENST00000611969 CDX2Q99626 313 aaPredicted RBP17.03■□□□□ 0.32
LINC00116-203ENST00000611969 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
LINC00116-203ENST00000611969 MYO5AQ9Y4I1 1855 aaKnown RBP17.03■□□□□ 0.32
LINC00116-203ENST00000611969 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
LINC00116-203ENST00000611969 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 MORN1Q5T089 497 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 GPR142Q7Z601 462 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 MAFAQ8NHW3 353 aaPredicted RBP17.02■□□□□ 0.32
LINC00116-203ENST00000611969 APBA2Q99767 749 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
LINC00116-203ENST00000611969 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms