RNA–Protein interactions for RNA: ENST00000611910.4

SYNRG-216, Transcript of synergin gamma, humanhuman

TSL 1 (best)

Gene SYNRG, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-216ENST00000611910 NKX2-3Q8TAU0 364 aa11.75□□□□□ -0.53
SYNRG-216ENST00000611910 ESR2Q92731 530 aa11.75□□□□□ -0.53
SYNRG-216ENST00000611910 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
SYNRG-216ENST00000611910 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
SYNRG-216ENST00000611910 MAGEB6P1A0A0J9YX57 407 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 SNAP23O00161 211 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CCP110O43303 1012 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 NTSR2O95665 410 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 FANCCQ00597 558 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 MYL5Q02045 173 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 PPARAQ07869 468 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CCAR2Q8N163 923 aaKnown RBP11.74□□□□□ -0.53
SYNRG-216ENST00000611910 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 RAI14Q9P0K7 980 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 SLIT2O94813 1529 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 SERPINC1P01008 464 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 TUBB4AP04350 444 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 NCAPHQ15003 741 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CAVIN4Q5BKX8 364 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ANKRD18AQ8IVF6 992 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
SYNRG-216ENST00000611910 MIGA1Q8NAN2 632 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 KIF18AQ8NI77 898 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ANKRD7Q92527 254 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ZKSCAN3Q9BRR0 538 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 DACH1Q9UI36 760 aa11.74□□□□□ -0.53
SYNRG-216ENST00000611910 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
SYNRG-216ENST00000611910 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 BTBD18B2RXH4 712 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
SYNRG-216ENST00000611910 KCNJ6P48051 423 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 UBASH3AP57075 661 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 PNOCQ13519 176 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 ZNF654Q8IZM8 581 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 RREB1Q92766 1687 aa11.73□□□□□ -0.53
SYNRG-216ENST00000611910 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 LONRF3Q496Y0 759 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 SPATA31A1Q5TZJ5 1347 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 ARID3AQ99856 593 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 KCNJ14Q9UNX9 436 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 MYH6P13533 1939 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 PTPREP23469 700 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 CATIPQ7Z7H3 387 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
SYNRG-216ENST00000611910 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
SYNRG-216ENST00000611910 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.53
SYNRG-216ENST00000611910 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
SYNRG-216ENST00000611910 TNKSO95271 1327 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 USP27XA6NNY8 438 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 CALM1P0DP23 149 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 CALM2P0DP24 149 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 CALM3P0DP25 149 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 GUCY1A2P33402 732 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 ITPK1Q13572 414 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 POSTNQ15063 836 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 CFAP100Q494V2 611 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 IQCA1Q86XH1 822 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 BRMS1Q9HCU9 246 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 PCDHA5Q9Y5H7 936 aa11.71□□□□□ -0.54
SYNRG-216ENST00000611910 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.54
SYNRG-216ENST00000611910 ZNF804BA4D1E1 1349 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
SYNRG-216ENST00000611910 ARMCX5Q6P1M9 558 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 SMARCE1Q969G3 411 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
SYNRG-216ENST00000611910 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
SYNRG-216ENST00000611910 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
SYNRG-216ENST00000611910 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
SYNRG-216ENST00000611910 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
SYNRG-216ENST00000611910 SEMA3EO15041 775 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms