RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 FERMT2Q96AC1 680 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 TUBB2BQ9BVA1 445 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 PPRC1Q5VV67 1664 aaKnown RBP14.02□□□□□ -0.17
CDH1-212ENST00000611625 TBC1D8BQ0IIM8 1120 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 DYDC1Q8WWB3 177 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 PUS3Q9BZE2 481 aaKnown RBP14.02□□□□□ -0.17
CDH1-212ENST00000611625 JAG2Q9Y219 1238 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 TBCAO75347 108 aaKnown RBP14.02□□□□□ -0.17
CDH1-212ENST00000611625 TMTC1Q8IUR5 882 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 ERMNQ8TAM6 284 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
CDH1-212ENST00000611625 KRT9P35527 623 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
CDH1-212ENST00000611625 CETN1Q12798 172 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 VPS54Q9P1Q0 977 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 TNNI2P48788 182 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 PLCD1P51178 756 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 ADKP55263 362 aaKnown RBP14.01□□□□□ -0.17
CDH1-212ENST00000611625 CTSWP56202 376 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 BTG4Q9NY30 223 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 OPA1O60313 960 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
CDH1-212ENST00000611625 LDHBP07195 334 aaKnown RBP14.01□□□□□ -0.17
CDH1-212ENST00000611625 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 TAB2Q9NYJ8 693 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 A0A087WWV3 80 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 ADORA1P30542 326 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 KRBA2Q6ZNG9 492 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 STAMQ92783 540 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 FANCLQ9NW38 375 aa14.01□□□□□ -0.17
CDH1-212ENST00000611625 LETM2Q2VYF4 491 aa14□□□□□ -0.17
CDH1-212ENST00000611625 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
CDH1-212ENST00000611625 POLR3EQ9NVU0 708 aa14□□□□□ -0.17
CDH1-212ENST00000611625 CIAO1O76071 339 aa14□□□□□ -0.17
CDH1-212ENST00000611625 STXBP4Q6ZWJ1 553 aa14□□□□□ -0.17
CDH1-212ENST00000611625 NBPF11Q86T75 865 aa14□□□□□ -0.17
CDH1-212ENST00000611625 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
CDH1-212ENST00000611625 CLIC6Q96NY7 704 aa14□□□□□ -0.17
CDH1-212ENST00000611625 PSDA5PKW4 1024 aaPredicted RBP14□□□□□ -0.17
CDH1-212ENST00000611625 BTBD18B2RXH4 712 aa14□□□□□ -0.17
CDH1-212ENST00000611625 ARID5AQ03989 594 aa14□□□□□ -0.17
CDH1-212ENST00000611625 SLC39A14Q15043 492 aa14□□□□□ -0.17
CDH1-212ENST00000611625 ZBTB38Q8NAP3 1195 aaPredicted RBP14□□□□□ -0.17
CDH1-212ENST00000611625 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
CDH1-212ENST00000611625 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
CDH1-212ENST00000611625 CETN2P41208 172 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 PPP1R2P41236 205 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 MACROD2A1Z1Q3 448 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 PDE4DQ08499 809 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
CDH1-212ENST00000611625 CSGALNACT2Q8N6G5 542 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 LINC00301Q8NCQ3 95 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 PLCG2P16885 1265 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
CDH1-212ENST00000611625 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 EHMT1Q9H9B1 1298 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 ABCA9Q8IUA7 1624 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PTPRMP28827 1452 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PPARAQ07869 468 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PICALMQ13492 652 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
CDH1-212ENST00000611625 UBE3CQ15386 1083 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PPP2R2CQ9Y2T4 447 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PCDHA5Q9Y5H7 936 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 ERBB3P21860 1342 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 M0R2C6 588 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
CDH1-212ENST00000611625 DESI2Q9BSY9 194 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
CDH1-212ENST00000611625 APOA5Q6Q788 366 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 SYCP3Q8IZU3 236 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 TRIML1Q8N9V2 468 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 SELENOOQ9BVL4 669 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 TAOK3Q9H2K8 898 aa13.98□□□□□ -0.17
CDH1-212ENST00000611625 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 VAV2P52735 878 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 SV2BQ7L1I2 683 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 ATP10DQ9P241 1426 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 MED23Q9ULK4 1368 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 GSTTP1A0A1W2PQM5 241 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 F8W031 263 aaPredicted RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 GCOM1H8Y6P7 765 aaPredicted RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 MYZAPP0CAP1 466 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 MAP2K1Q02750 393 aaPredicted RBP13.97□□□□□ -0.17
CDH1-212ENST00000611625 OSBP2Q969R2 916 aa13.97□□□□□ -0.17
CDH1-212ENST00000611625 BLZF1Q9H2G9 400 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms