RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 LRRCC1Q9C099 1032 aa21.56■■□□□ 1.04
MUC1-224ENST00000611577 CCDC8Q9H0W5 538 aaPredicted RBP21.56■■□□□ 1.04
MUC1-224ENST00000611577 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
MUC1-224ENST00000611577 GABRQQ9UN88 632 aa21.56■■□□□ 1.04
MUC1-224ENST00000611577 ENTPD3O75355 529 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
MUC1-224ENST00000611577 PTPRAP18433 802 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 UBE2Q1Q7Z7E8 422 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 DZIP1Q86YF9 867 aaKnown RBP21.55■■□□□ 1.04
MUC1-224ENST00000611577 DBNDD2Q9BQY9 259 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 RBM27Q9P2N5 1060 aaKnown RBP21.55■■□□□ 1.04
MUC1-224ENST00000611577 RFX7Q2KHR2 1363 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 GAKO14976 1311 aa21.55■■□□□ 1.04
MUC1-224ENST00000611577 UQCRFS1P1P0C7P4 283 aa21.54■■□□□ 1.04
MUC1-224ENST00000611577 SH3BP5LQ7L8J4 393 aa21.54■■□□□ 1.04
MUC1-224ENST00000611577 ZGPATQ8N5A5 531 aaKnown RBP21.54■■□□□ 1.04
MUC1-224ENST00000611577 U2AF1L4Q8WU68 220 aaKnown RBP21.54■■□□□ 1.04
MUC1-224ENST00000611577 EAF2Q96CJ1 260 aaPredicted RBP21.54■■□□□ 1.04
MUC1-224ENST00000611577 UNC93B1Q9H1C4 597 aa21.54■■□□□ 1.04
MUC1-224ENST00000611577 DCTPP1Q9H773 170 aa21.54■■□□□ 1.04
MUC1-224ENST00000611577 FARP2O94887 1054 aaPredicted RBP21.53■■□□□ 1.04
MUC1-224ENST00000611577 RWDD1Q9H446 243 aaPredicted RBP21.53■■□□□ 1.04
MUC1-224ENST00000611577 AFG3L2Q9Y4W6 797 aa21.53■■□□□ 1.04
MUC1-224ENST00000611577 MGAMO43451 1857 aa21.53■■□□□ 1.04
MUC1-224ENST00000611577 DDTLA6NHG4 134 aaPredicted RBP21.52■■□□□ 1.04
MUC1-224ENST00000611577 TNPO2O14787 897 aaKnown RBP21.52■■□□□ 1.04
MUC1-224ENST00000611577 ADCY3O60266 1144 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 SLURP2P0DP57 97 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 FLT3LGP49771 235 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 PICALMQ13492 652 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 RASGRF1Q13972 1273 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 SMCR8Q8TEV9 937 aaPredicted RBP21.52■■□□□ 1.04
MUC1-224ENST00000611577 ABCF2Q9UG63 623 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 SLC45A1Q9Y2W3 748 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
MUC1-224ENST00000611577 TRIM75PA6NK02 468 aa21.51■■□□□ 1.03
MUC1-224ENST00000611577 ELNP15502 786 aa21.51■■□□□ 1.03
MUC1-224ENST00000611577 HDAC1Q13547 482 aaPredicted RBP21.51■■□□□ 1.03
MUC1-224ENST00000611577 SLF2Q8IX21 1173 aa21.51■■□□□ 1.03
MUC1-224ENST00000611577 DDX4Q9NQI0 724 aaKnown RBP21.51■■□□□ 1.03
MUC1-224ENST00000611577 TLR7Q9NYK1 1049 aaKnown RBP21.51■■□□□ 1.03
MUC1-224ENST00000611577 DBNLQ9UJU6 430 aaKnown RBP21.51■■□□□ 1.03
MUC1-224ENST00000611577 NR2E3Q9Y5X4 410 aa21.51■■□□□ 1.03
MUC1-224ENST00000611577 DOCK1Q14185 1865 aa21.5■■□□□ 1.03
MUC1-224ENST00000611577 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
MUC1-224ENST00000611577 INHAP05111 366 aa21.5■■□□□ 1.03
MUC1-224ENST00000611577 NEFLP07196 543 aa21.5■■□□□ 1.03
MUC1-224ENST00000611577 ARID4AP29374 1257 aaPredicted RBP21.5■■□□□ 1.03
MUC1-224ENST00000611577 BTDP43251 543 aa21.5■■□□□ 1.03
MUC1-224ENST00000611577 SPATA5Q8NB90 893 aa21.5■■□□□ 1.03
MUC1-224ENST00000611577 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.5■■□□□ 1.03
MUC1-224ENST00000611577 ZBTB22O15209 634 aa21.49■■□□□ 1.03
MUC1-224ENST00000611577 CTNND1O60716 968 aaKnown RBP21.49■■□□□ 1.03
MUC1-224ENST00000611577 SGPL1O95470 568 aa21.49■■□□□ 1.03
MUC1-224ENST00000611577 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
MUC1-224ENST00000611577 CCDC84Q86UT8 332 aaPredicted RBP21.49■■□□□ 1.03
MUC1-224ENST00000611577 TAOK2Q9UL54 1235 aa21.49■■□□□ 1.03
MUC1-224ENST00000611577 MROH7-TTC4A0A0A0MT08 1334 aa21.49■■□□□ 1.03
MUC1-224ENST00000611577 PDS5AQ29RF7 1337 aaKnown RBP21.49■■□□□ 1.03
MUC1-224ENST00000611577 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
MUC1-224ENST00000611577 PXYLP1Q8TE99 480 aa21.48■■□□□ 1.03
MUC1-224ENST00000611577 AGTPBP1Q9UPW5 1226 aa21.48■■□□□ 1.03
MUC1-224ENST00000611577 PTPRFP10586 1907 aa21.48■■□□□ 1.03
MUC1-224ENST00000611577 IRF5Q13568 498 aa21.47■■□□□ 1.03
MUC1-224ENST00000611577 ANKRD13CQ8N6S4 541 aa21.47■■□□□ 1.03
MUC1-224ENST00000611577 FAM163AQ96GL9 167 aaPredicted RBP21.47■■□□□ 1.03
MUC1-224ENST00000611577 DEFB118Q96PH6 123 aa21.47■■□□□ 1.03
MUC1-224ENST00000611577 PRO3102Q9H379 93 aa21.47■■□□□ 1.03
MUC1-224ENST00000611577 HMG20BQ9P0W2 317 aa21.47■■□□□ 1.03
MUC1-224ENST00000611577 PHIPQ8WWQ0 1821 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 TFRCP02786 760 aaKnown RBP21.46■■□□□ 1.03
MUC1-224ENST00000611577 MCAMP43121 646 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 TREML2Q5T2D2 321 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 GPATCH3Q96I76 525 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 SNRKQ9NRH2 765 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
MUC1-224ENST00000611577 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 EVI5O60447 810 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 MECOMQ03112 1051 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 ANKRD45Q5TZF3 282 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 COA7Q96BR5 231 aa21.45■■□□□ 1.02
MUC1-224ENST00000611577 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
MUC1-224ENST00000611577 GPR75-ASB3A0A0A6YYF3 556 aa21.44■■□□□ 1.02
MUC1-224ENST00000611577 RHBDL3P58872 404 aa21.44■■□□□ 1.02
MUC1-224ENST00000611577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.44■■□□□ 1.02
MUC1-224ENST00000611577 PAK6Q9NQU5 681 aaPredicted RBP21.44■■□□□ 1.02
MUC1-224ENST00000611577 LRP2BPQ9P2M1 347 aa21.44■■□□□ 1.02
MUC1-224ENST00000611577 TBC1D12O60347 775 aa21.43■■□□□ 1.02
MUC1-224ENST00000611577 FAM110CQ1W6H9 321 aa21.43■■□□□ 1.02
MUC1-224ENST00000611577 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
MUC1-224ENST00000611577 CAPN2P17655 700 aa21.42■■□□□ 1.02
MUC1-224ENST00000611577 PROCA1Q8NCQ7 364 aaPredicted RBP21.42■■□□□ 1.02
MUC1-224ENST00000611577 ZNF384Q8TF68 577 aa21.42■■□□□ 1.02
MUC1-224ENST00000611577 OSBPL5Q9H0X9 879 aaPredicted RBP21.42■■□□□ 1.02
MUC1-224ENST00000611577 NPM3O75607 178 aaKnown RBP21.41■■□□□ 1.02
MUC1-224ENST00000611577 IGHDP01880 384 aa21.41■■□□□ 1.02
MUC1-224ENST00000611577 ZAP70P43403 619 aa21.41■■□□□ 1.02
MUC1-224ENST00000611577 SPP2Q13103 211 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms