RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
SENP3-209ENST00000610454 GCC1Q96CN9 775 aa16.2■□□□□ 0.18
SENP3-209ENST00000610454 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
SENP3-209ENST00000610454 SAP30BPQ9UHR5 308 aaKnown RBP16.2■□□□□ 0.18
SENP3-209ENST00000610454 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 ERC2O15083 957 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 FKTNO75072 461 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 PTPN18Q99952 460 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 ZFYVE28Q9HCC9 887 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 SUPT16HQ9Y5B9 1047 aaKnown RBP16.19■□□□□ 0.18
SENP3-209ENST00000610454 ZHX2Q9Y6X8 837 aa16.19■□□□□ 0.18
SENP3-209ENST00000610454 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 PTPRAP18433 802 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 CRHR2Q13324 411 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SENP3-209ENST00000610454 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 CTU1Q7Z7A3 348 aaKnown RBP16.18■□□□□ 0.18
SENP3-209ENST00000610454 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
SENP3-209ENST00000610454 ZCCHC17Q9NP64 241 aaKnown RBP16.18■□□□□ 0.18
SENP3-209ENST00000610454 KCNH4Q9UQ05 1017 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
SENP3-209ENST00000610454 CXCL11O14625 94 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 ADD2P35612 726 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 LRRFIP1Q32MZ4 808 aaKnown RBP16.17■□□□□ 0.18
SENP3-209ENST00000610454 ANKRD45Q5TZF3 282 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 TTC6Q86TZ1 520 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 DDRGK1Q96HY6 314 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 ABHD8Q96I13 439 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 RIOK1Q9BRS2 568 aaKnown RBP16.17■□□□□ 0.18
SENP3-209ENST00000610454 MCOLN1Q9GZU1 580 aa16.17■□□□□ 0.18
SENP3-209ENST00000610454 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
SENP3-209ENST00000610454 BTBD19C9JJ37 291 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
SENP3-209ENST00000610454 CAP2P40123 477 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 FASTKD5Q7L8L6 764 aaKnown RBP16.16■□□□□ 0.18
SENP3-209ENST00000610454 ERO1AQ96HE7 468 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 R3HDMLQ9H3Y0 253 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 SIPA1L1O43166 1804 aa16.16■□□□□ 0.18
SENP3-209ENST00000610454 TCRBV5S4A2TA0A5A2 114 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 GLRX3O76003 335 aaKnown RBP16.15■□□□□ 0.18
SENP3-209ENST00000610454 MBD4O95243 580 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 ASNSP08243 561 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 MX1P20591 662 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 UBE3CQ15386 1083 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 PKN2Q16513 984 aaKnown RBP16.15■□□□□ 0.18
SENP3-209ENST00000610454 GADL1Q6ZQY3 521 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 ANKRD23Q86SG2 305 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 AS3MTQ9HBK9 375 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
SENP3-209ENST00000610454 USP17L5A8MUK1 530 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 PDHXO00330 501 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 SP3Q02447 781 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 ARHGEF6Q15052 776 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 LCORLQ8N3X6 602 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
SENP3-209ENST00000610454 PTPRFP10586 1907 aa16.13■□□□□ 0.17
SENP3-209ENST00000610454 A0A0G2JLL6 359 aaPredicted RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 PRRT2Q7Z6L0 340 aaPredicted RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 METTL16Q86W50 562 aaKnown RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
SENP3-209ENST00000610454 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 EHD4Q9H223 541 aa16.13■□□□□ 0.17
SENP3-209ENST00000610454 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.13■□□□□ 0.17
SENP3-209ENST00000610454 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
SENP3-209ENST00000610454 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 TLR2O60603 784 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 KIF22Q14807 665 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 CCDC84Q86UT8 332 aaPredicted RBP16.12■□□□□ 0.17
SENP3-209ENST00000610454 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 ATP8A2Q9NTI2 1148 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 GINM1Q9NU53 330 aa16.12■□□□□ 0.17
SENP3-209ENST00000610454 GDF11O95390 407 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 SPP2Q13103 211 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
SENP3-209ENST00000610454 FSD1Q9BTV5 496 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
SENP3-209ENST00000610454 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
SENP3-209ENST00000610454 MYH8P13535 1937 aa16.1■□□□□ 0.17
SENP3-209ENST00000610454 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
SENP3-209ENST00000610454 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
SENP3-209ENST00000610454 CERKLQ49MI3 558 aaPredicted RBP16.1■□□□□ 0.17
SENP3-209ENST00000610454 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms