RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CCDC175P0C221 793 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 ATP1A2P50993 1020 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 CYB5D1Q6P9G0 228 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 FMR1NBQ8N0W7 255 aaPredicted RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 BPIFA3Q9BQP9 254 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
CTCFL-218ENST00000608440 ATP6V0A4Q9HBG4 840 aa14.23□□□□□ -0.13
CTCFL-218ENST00000608440 GOLGA6BA6NDN3 693 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 NLRP12P59046 1061 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 TC2NQ8N9U0 490 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 DDX17Q92841 729 aaKnown RBP14.22□□□□□ -0.13
CTCFL-218ENST00000608440 TM6SF1Q9BZW5 370 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 MYO1BO43795 1136 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 AMPHP49418 695 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 WDR93Q6P2C0 686 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 KIAA1328Q86T90 577 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 MRPS27Q92552 414 aaKnown RBP14.22□□□□□ -0.13
CTCFL-218ENST00000608440 PICK1Q9NRD5 415 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 MYO6Q9UM54 1294 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 MARF1Q9Y4F3 1742 aaKnown RBP14.22□□□□□ -0.13
CTCFL-218ENST00000608440 DCCP43146 1447 aa14.22□□□□□ -0.13
CTCFL-218ENST00000608440 COQ9O75208 318 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 C1QTNF12Q5T7M4 302 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 CREB3L3Q68CJ9 461 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 BLOC1S2Q6QNY1 142 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 PI4K2BQ8TCG2 481 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 HAUS2Q9NVX0 235 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 RBM8AQ9Y5S9 174 aaKnown RBP14.21□□□□□ -0.13
CTCFL-218ENST00000608440 TAF6LQ9Y6J9 622 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 OPLAHO14841 1288 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 ABL1P00519 1130 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 PPARDQ03181 441 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 USP4Q13107 963 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.13
CTCFL-218ENST00000608440 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTCFL-218ENST00000608440 INTS13Q9NVM9 706 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 FLT4P35916 1363 aa14.21□□□□□ -0.13
CTCFL-218ENST00000608440 ECEL1O95672 775 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 SLC8A3P57103 927 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 PIP4K2BP78356 416 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 G2E3Q7L622 706 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 STK31Q9BXU1 1019 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.14
CTCFL-218ENST00000608440 SBNO1A3KN83 1393 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 KIF4AO95239 1232 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-218ENST00000608440 FUKQ8N0W3 1084 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 SMARCC2Q8TAQ2 1214 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-218ENST00000608440 ATP2C2O75185 946 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 MYBL1P10243 752 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 TTLL7Q6ZT98 887 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 DRAXINQ8NBI3 349 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-218ENST00000608440 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 SELENOOQ9BVL4 669 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
CTCFL-218ENST00000608440 TUBBP07437 444 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 NECTIN1Q15223 517 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 PDCD2Q16342 344 aaPredicted RBP14.19□□□□□ -0.14
CTCFL-218ENST00000608440 NSMCE1Q8WV22 266 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 CPLX3Q8WVH0 158 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 RANBP1P43487 201 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 TUBB4BP68371 445 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 MYO1EQ12965 1108 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 SF3A1Q15459 793 aaKnown RBP14.19□□□□□ -0.14
CTCFL-218ENST00000608440 NAA35Q5VZE5 725 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 KCTD16Q68DU8 428 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 SULT6B1Q6IMI4 303 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 OR8K1Q8NGG5 319 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 SH3GL2Q99962 352 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 ZCWPW1Q9H0M4 648 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 LMCD1Q9NZU5 365 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 KIF1AQ12756 1690 aa14.19□□□□□ -0.14
CTCFL-218ENST00000608440 ATXN2Q99700 1313 aaKnown RBP14.18□□□□□ -0.14
CTCFL-218ENST00000608440 MYL5Q02045 173 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 NAPGQ99747 312 aaPredicted RBP14.18□□□□□ -0.14
CTCFL-218ENST00000608440 ADGRG1Q9Y653 693 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 IKBKBO14920 756 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
CTCFL-218ENST00000608440 UPP2O95045 317 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 FAM163BP0C2L3 166 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 SEC24CP53992 1094 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 USP14P54578 494 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 WHAMMP3Q1A5X7 153 aa14.18□□□□□ -0.14
CTCFL-218ENST00000608440 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms