RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 DYNLL1P63167 89 aaKnown RBP23.32■■□□□ 1.32
CTSA-217ENST00000607482 MAP3K10Q02779 954 aa23.32■■□□□ 1.32
CTSA-217ENST00000607482 OTOP1Q7RTM1 612 aa23.32■■□□□ 1.32
CTSA-217ENST00000607482 SAP30BPQ9UHR5 308 aaKnown RBP23.32■■□□□ 1.32
CTSA-217ENST00000607482 TLR2O60603 784 aa23.31■■□□□ 1.32
CTSA-217ENST00000607482 SLURP2P0DP57 97 aa23.31■■□□□ 1.32
CTSA-217ENST00000607482 MLLT1Q03111 559 aaPredicted RBP23.31■■□□□ 1.32
CTSA-217ENST00000607482 SLC9C2Q5TAH2 1124 aa23.31■■□□□ 1.32
CTSA-217ENST00000607482 FLT1P17948 1338 aa23.31■■□□□ 1.32
CTSA-217ENST00000607482 MAST2Q6P0Q8 1798 aa23.3■■□□□ 1.32
CTSA-217ENST00000607482 SOX10P56693 466 aa23.3■■□□□ 1.32
CTSA-217ENST00000607482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTSA-217ENST00000607482 PARK7Q99497 189 aaKnown RBP23.3■■□□□ 1.32
CTSA-217ENST00000607482 PALD1Q9ULE6 856 aa23.3■■□□□ 1.32
CTSA-217ENST00000607482 COL2A1P02458 1487 aaPredicted RBP23.3■■□□□ 1.32
CTSA-217ENST00000607482 LAMB1P07942 1786 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 MAGEB6P1A0A0J9YX57 407 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 SLC4A8Q2Y0W8 1093 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 FOXP4Q8IVH2 680 aaPredicted RBP23.29■■□□□ 1.32
CTSA-217ENST00000607482 GPATCH3Q96I76 525 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.29■■□□□ 1.32
CTSA-217ENST00000607482 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 AFG3L2Q9Y4W6 797 aa23.29■■□□□ 1.32
CTSA-217ENST00000607482 AS3MTQ9HBK9 375 aa23.28■■□□□ 1.32
CTSA-217ENST00000607482 CPA4Q9UI42 421 aa23.28■■□□□ 1.32
CTSA-217ENST00000607482 A0A0G2JLL6 359 aaPredicted RBP23.27■■□□□ 1.32
CTSA-217ENST00000607482 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
CTSA-217ENST00000607482 CAP2P40123 477 aa23.27■■□□□ 1.32
CTSA-217ENST00000607482 PRRT2Q7Z6L0 340 aaPredicted RBP23.27■■□□□ 1.32
CTSA-217ENST00000607482 TBC1D2Q9BYX2 928 aa23.27■■□□□ 1.32
CTSA-217ENST00000607482 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
CTSA-217ENST00000607482 ZBTB47Q9UFB7 747 aaPredicted RBP23.27■■□□□ 1.32
CTSA-217ENST00000607482 SMARCA5O60264 1052 aaPredicted RBP23.26■■□□□ 1.31
CTSA-217ENST00000607482 PDE6AP16499 860 aa23.26■■□□□ 1.31
CTSA-217ENST00000607482 ATP5JP18859 108 aa23.26■■□□□ 1.31
CTSA-217ENST00000607482 RRP1P56182 461 aaKnown RBP23.26■■□□□ 1.31
CTSA-217ENST00000607482 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
CTSA-217ENST00000607482 CRNKL1Q9BZJ0 848 aaKnown RBP23.26■■□□□ 1.31
CTSA-217ENST00000607482 PTPN22Q9Y2R2 807 aa23.26■■□□□ 1.31
CTSA-217ENST00000607482 USP17L5A8MUK1 530 aa23.25■■□□□ 1.31
CTSA-217ENST00000607482 SPP2Q13103 211 aa23.25■■□□□ 1.31
CTSA-217ENST00000607482 TTC6Q86TZ1 520 aa23.25■■□□□ 1.31
CTSA-217ENST00000607482 CCDC84Q86UT8 332 aaPredicted RBP23.25■■□□□ 1.31
CTSA-217ENST00000607482 ZNF280CQ8ND82 737 aa23.25■■□□□ 1.31
CTSA-217ENST00000607482 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.25■■□□□ 1.31
CTSA-217ENST00000607482 POLR3DP05423 398 aaPredicted RBP23.24■■□□□ 1.31
CTSA-217ENST00000607482 ASNSP08243 561 aa23.24■■□□□ 1.31
CTSA-217ENST00000607482 LACTBP83111 547 aaPredicted RBP23.24■■□□□ 1.31
CTSA-217ENST00000607482 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
CTSA-217ENST00000607482 FMNL1O95466 1100 aaPredicted RBP23.23■■□□□ 1.31
CTSA-217ENST00000607482 CYP2C8P10632 490 aa23.23■■□□□ 1.31
CTSA-217ENST00000607482 PABPC4Q13310 644 aaKnown RBP eCLIP23.23■■□□□ 1.31
CTSA-217ENST00000607482 NBPF11Q86T75 865 aa23.23■■□□□ 1.31
CTSA-217ENST00000607482 HAUS7Q99871 368 aa23.23■■□□□ 1.31
CTSA-217ENST00000607482 PNMA3Q9UL41 463 aa23.23■■□□□ 1.31
CTSA-217ENST00000607482 MYO5AQ9Y4I1 1855 aaKnown RBP23.22■■□□□ 1.31
CTSA-217ENST00000607482 GNRH1P01148 92 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 HOXD10P28358 340 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 MOGSQ13724 837 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 ZSCAN25Q6NSZ9 544 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 C17orf99Q6UX52 265 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
CTSA-217ENST00000607482 DCTPP1Q9H773 170 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 ECHDC1Q9NTX5 307 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 TMOD4Q9NZQ9 345 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 DOCK1Q14185 1865 aa23.22■■□□□ 1.31
CTSA-217ENST00000607482 GDF11O95390 407 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 PSMC4P43686 418 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 RGS19P49795 217 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 SLC9C1Q4G0N8 1177 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 AGTPBP1Q9UPW5 1226 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
CTSA-217ENST00000607482 HMGCS2P54868 508 aa23.2■■□□□ 1.3
CTSA-217ENST00000607482 AMOTL1Q8IY63 956 aa23.2■■□□□ 1.3
CTSA-217ENST00000607482 GINM1Q9NU53 330 aa23.2■■□□□ 1.3
CTSA-217ENST00000607482 MCM9Q9NXL9 1143 aa23.2■■□□□ 1.3
CTSA-217ENST00000607482 OSBPP22059 807 aa23.19■■□□□ 1.3
CTSA-217ENST00000607482 PROCA1Q8NCQ7 364 aaPredicted RBP23.19■■□□□ 1.3
CTSA-217ENST00000607482 RIOK1Q9BRS2 568 aaKnown RBP23.19■■□□□ 1.3
CTSA-217ENST00000607482 ARHGAP39Q9C0H5 1083 aa23.19■■□□□ 1.3
CTSA-217ENST00000607482 PRMT2P55345 433 aa23.18■■□□□ 1.3
CTSA-217ENST00000607482 FCGRTP55899 365 aa23.18■■□□□ 1.3
CTSA-217ENST00000607482 RRP1BQ14684 758 aaKnown RBP23.18■■□□□ 1.3
CTSA-217ENST00000607482 TMEM106CQ9BVX2 250 aa23.18■■□□□ 1.3
CTSA-217ENST00000607482 CABP5Q9NP86 173 aa23.18■■□□□ 1.3
CTSA-217ENST00000607482 PTCH2Q9Y6C5 1203 aa23.18■■□□□ 1.3
CTSA-217ENST00000607482 MTMR2Q13614 643 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 CERKLQ49MI3 558 aaPredicted RBP23.17■■□□□ 1.3
CTSA-217ENST00000607482 METTL16Q86W50 562 aaKnown RBP23.17■■□□□ 1.3
CTSA-217ENST00000607482 RAET1EQ8TD07 263 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 CRBNQ96SW2 442 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 EHD4Q9H223 541 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 ZBTB21Q9ULJ3 1066 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 PCDHB15Q9Y5E8 787 aa23.17■■□□□ 1.3
CTSA-217ENST00000607482 MBD4O95243 580 aa23.16■■□□□ 1.3
CTSA-217ENST00000607482 GH2P01242 217 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms