RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 ELP3Q9H9T3 547 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 CSADQ9Y600 493 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
CTSA-215ENST00000607187 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
CTSA-215ENST00000607187 BAG3O95817 575 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 INHBEP58166 350 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 PPP4CP60510 307 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 PICALMQ13492 652 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
CTSA-215ENST00000607187 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 OPTNQ96CV9 577 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 ANTXR1Q9H6X2 564 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTSA-215ENST00000607187 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
CTSA-215ENST00000607187 MYH1P12882 1939 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 DDTLA6NHG4 134 aaPredicted RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 DPYSL4O14531 572 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 IDH1O75874 414 aaKnown RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 PLCG2P16885 1265 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 TNS4Q8IZW8 715 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 ZKSCAN4Q969J2 545 aaPredicted RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
CTSA-215ENST00000607187 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
CTSA-215ENST00000607187 SPDYE5A6NIY4 337 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
CTSA-215ENST00000607187 ATP5JP18859 108 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 CYP7A1P22680 504 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 INPP5BP32019 993 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 ERO1BQ86YB8 467 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
CTSA-215ENST00000607187 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
CTSA-215ENST00000607187 SIPA1L1O43166 1804 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
CTSA-215ENST00000607187 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 PHIPQ8WWQ0 1821 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 PTPRFP10586 1907 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
CTSA-215ENST00000607187 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 TBC1D12O60347 775 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
CTSA-215ENST00000607187 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
CTSA-215ENST00000607187 PTPN18Q99952 460 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 FAM117AQ9C073 453 aa12.12□□□□□ -0.47
CTSA-215ENST00000607187 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
CTSA-215ENST00000607187 CENPFP49454 3210 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTSA-215ENST00000607187 GOLIM4O00461 696 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 TBC1D8O95759 1140 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTSA-215ENST00000607187 GTF2A2P52657 109 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 DYNLL1P63167 89 aaKnown RBP12.11□□□□□ -0.47
CTSA-215ENST00000607187 PPATQ06203 517 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 PPIL2Q13356 520 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 AAMPQ13685 434 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 NOM1Q5C9Z4 860 aaKnown RBP12.11□□□□□ -0.47
CTSA-215ENST00000607187 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 TGFBRAP1Q8WUH2 860 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 HAUS7Q99871 368 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 BOLA2Q9H3K6 86 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 FLT1P17948 1338 aa12.11□□□□□ -0.47
CTSA-215ENST00000607187 IRF6O14896 467 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 GPR37O15354 613 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 PDE6AP16499 860 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 MIGA1Q8NAN2 632 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 BRI3BPQ8WY22 251 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
CTSA-215ENST00000607187 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
CTSA-215ENST00000607187 PI4KBQ9UBF8 816 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 HTTP42858 3142 aa12.1□□□□□ -0.47
CTSA-215ENST00000607187 NAV1Q8NEY1 1877 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 CCL15-CCL14A0A0B4J2E2 113 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 TCRBV5S4A2TA0A5A2 114 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
CTSA-215ENST00000607187 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
CTSA-215ENST00000607187 CCL15Q16663 113 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 ARID3AQ99856 593 aa12.09□□□□□ -0.47
CTSA-215ENST00000607187 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms