RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 MAFBQ9Y5Q3 323 aaPredicted RBP12.16□□□□□ -0.46
CSNK1A1-209ENST00000606299 GPC6Q9Y625 555 aaPredicted RBP12.16□□□□□ -0.46
CSNK1A1-209ENST00000606299 ATRNO75882 1429 aa12.16□□□□□ -0.46
CSNK1A1-209ENST00000606299 PNMA6EA0A0J9YXQ4 647 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 STARD3NLO95772 234 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 GOLGA6L1Q8N7Z2 621 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 PLBD2Q8NHP8 589 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 ZDHHC1Q8WTX9 485 aa12.15□□□□□ -0.46
CSNK1A1-209ENST00000606299 NEURL1BA8MQ27 555 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 GRM8O00222 908 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 ATXN7O15265 892 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 IGKV5-2P06315 115 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
CSNK1A1-209ENST00000606299 LAMB2P55268 1798 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 GDF11O95390 407 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 FAM157BP0CG42 384 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 CALR3Q96L12 384 aaKnown RBP12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 TRPC5Q9UL62 973 aaPredicted RBP12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
CSNK1A1-209ENST00000606299 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 KCNQ2O43526 872 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 NOS2P35228 1153 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 IRS1P35568 1242 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 GCKRQ14397 625 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 FAM182BQ5T319 152 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 SLCO4C1Q6ZQN7 724 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 ARXQ96QS3 562 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 GJA3Q9Y6H8 435 aa12.12□□□□□ -0.47
CSNK1A1-209ENST00000606299 UTYO14607 1347 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 TXLNAP40222 546 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
CSNK1A1-209ENST00000606299 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 EML1O00423 815 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 C2CD2LO14523 706 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 ARAFP10398 606 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 SIK1P57059 783 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 CTBSQ01459 385 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 TNP2Q05952 138 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 LRRCC1Q9C099 1032 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
CSNK1A1-209ENST00000606299 A0A087WZG4 1122 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 DCDC2BA2VCK2 349 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 SURF6O75683 361 aaKnown RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 DKK1O94907 266 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 MAPTP10636 758 aaKnown RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 RASA1P20936 1047 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 C16orf71Q8IYS4 520 aaPredicted RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 BEND7Q8N7W2 519 aaPredicted RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 TSPAN10Q9H1Z9 355 aaPredicted RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 DNMT3AQ9Y6K1 912 aaPredicted RBP12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CSNK1A1-209ENST00000606299 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
CSNK1A1-209ENST00000606299 KHNYNO15037 678 aaKnown RBP12.07□□□□□ -0.48
CSNK1A1-209ENST00000606299 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms