RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
TUBE1-211ENST00000605457 GJA5P36382 358 aa17.12■□□□□ 0.33
TUBE1-211ENST00000605457 WBP1LQ9NX94 342 aa17.12■□□□□ 0.33
TUBE1-211ENST00000605457 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
TUBE1-211ENST00000605457 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 MKRN3Q13064 507 aaKnown RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 NOL9Q5SY16 702 aaKnown RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
TUBE1-211ENST00000605457 OPTNQ96CV9 577 aa17.11■□□□□ 0.33
TUBE1-211ENST00000605457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 DCP1AQ9NPI6 582 aaPredicted RBP17.11■□□□□ 0.33
TUBE1-211ENST00000605457 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 PRKAB2O43741 272 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 HLA-DOAP06340 250 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 DNAJC18Q9H819 358 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 M0R2C6 588 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 GPAA1O43292 621 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 ERO1BQ86YB8 467 aa17.1■□□□□ 0.33
TUBE1-211ENST00000605457 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
TUBE1-211ENST00000605457 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-211ENST00000605457 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-211ENST00000605457 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
TUBE1-211ENST00000605457 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
TUBE1-211ENST00000605457 SEC62Q99442 399 aaKnown RBP17.09■□□□□ 0.33
TUBE1-211ENST00000605457 EHD4Q9H223 541 aa17.09■□□□□ 0.33
TUBE1-211ENST00000605457 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
TUBE1-211ENST00000605457 SLC4A4Q9Y6R1 1079 aa17.09■□□□□ 0.33
TUBE1-211ENST00000605457 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
TUBE1-211ENST00000605457 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
TUBE1-211ENST00000605457 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
TUBE1-211ENST00000605457 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
TUBE1-211ENST00000605457 SERPINB13Q9UIV8 391 aa17.08■□□□□ 0.32
TUBE1-211ENST00000605457 PLCD1P51178 756 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 SREBF2Q12772 1141 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
TUBE1-211ENST00000605457 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 FOXN1O15353 648 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
TUBE1-211ENST00000605457 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
TUBE1-211ENST00000605457 TM4SF4P48230 202 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 EVX2Q03828 476 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 PPATQ06203 517 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 PPIL2Q13356 520 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
TUBE1-211ENST00000605457 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
TUBE1-211ENST00000605457 IRF6O14896 467 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 GNAT2P19087 354 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 CAP2P40123 477 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 GABPAQ06546 454 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 DDRGK1Q96HY6 314 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 PICK1Q9NRD5 415 aa17.06■□□□□ 0.32
TUBE1-211ENST00000605457 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 CA12O43570 354 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 CYP2D6P10635 497 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 PTPRAP18433 802 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
TUBE1-211ENST00000605457 HELLSQ9NRZ9 838 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
TUBE1-211ENST00000605457 CASP8AP2Q9UKL3 1982 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
TUBE1-211ENST00000605457 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 USP17L21D6R901 530 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 SDSP20132 328 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 GTF2A2P52657 109 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 INHBEP58166 350 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
TUBE1-211ENST00000605457 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 SHMT1P34896 483 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 NMIQ13287 307 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 RNF186Q9NXI6 227 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 SAGE1Q9NXZ1 904 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 KCNH4Q9UQ05 1017 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 FOXP2O15409 715 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 JAG1P78504 1218 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
TUBE1-211ENST00000605457 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-211ENST00000605457 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms