RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 MAP3K10Q02779 954 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 RGMBQ6NW40 437 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 AMOTL1Q8IY63 956 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 ANKRD13AQ8IZ07 590 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 CRACR2BQ8N4Y2 399 aaPredicted RBP18.64■□□□□ 0.57
CDCA3-211ENST00000603043 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.57
CDCA3-211ENST00000603043 MYH8P13535 1937 aa18.63■□□□□ 0.57
CDCA3-211ENST00000603043 UNCXA6NJT0 531 aa18.63■□□□□ 0.57
CDCA3-211ENST00000603043 MFAP1P55081 439 aaKnown RBP18.63■□□□□ 0.57
CDCA3-211ENST00000603043 FOXP4Q8IVH2 680 aaPredicted RBP18.63■□□□□ 0.57
CDCA3-211ENST00000603043 TRIM34Q9BYJ4 488 aa18.63■□□□□ 0.57
CDCA3-211ENST00000603043 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
CDCA3-211ENST00000603043 SERPINB13Q9UIV8 391 aa18.63■□□□□ 0.57
CDCA3-211ENST00000603043 USP17L12C9JPN9 530 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 USP17L21D6R901 530 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 TDO2P48775 406 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 PLCD1P51178 756 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 MAP3K9P80192 1104 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 EHD4Q9H223 541 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
CDCA3-211ENST00000603043 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
CDCA3-211ENST00000603043 ATAD5Q96QE3 1844 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 ZNF157P51786 506 aaPredicted RBP18.62■□□□□ 0.57
CDCA3-211ENST00000603043 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 CTR9Q6PD62 1173 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.62■□□□□ 0.57
CDCA3-211ENST00000603043 METTL16Q86W50 562 aaKnown RBP18.62■□□□□ 0.57
CDCA3-211ENST00000603043 RUFY2Q8WXA3 655 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 ZNF112Q9UJU3 913 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 CSADQ9Y600 493 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 DOCK1Q14185 1865 aa18.62■□□□□ 0.57
CDCA3-211ENST00000603043 PHF20L1A8MW92 1017 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 FOXP2O15409 715 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 CYP2D6P10635 497 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 INPP5BP32019 993 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 VGLL4Q14135 290 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
CDCA3-211ENST00000603043 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
CDCA3-211ENST00000603043 RAD50Q92878 1312 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 EVX2Q03828 476 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 GRM1Q13255 1194 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 NAPBQ9H115 298 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 IL25Q9H293 177 aa18.61■□□□□ 0.57
CDCA3-211ENST00000603043 CYP2D7A0A087X1C5 515 aa18.6■□□□□ 0.57
CDCA3-211ENST00000603043 HSPD1P10809 573 aaKnown RBP18.6■□□□□ 0.57
CDCA3-211ENST00000603043 SLC10A4Q96EP9 437 aa18.6■□□□□ 0.57
CDCA3-211ENST00000603043 CAPNS2Q96L46 248 aa18.6■□□□□ 0.57
CDCA3-211ENST00000603043 ECE1P42892 770 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 SBK1Q52WX2 424 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 ELP3Q9H9T3 547 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 CTNND1O60716 968 aaKnown RBP18.59■□□□□ 0.57
CDCA3-211ENST00000603043 RASAL3Q86YV0 1011 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 CCDC102AQ96A19 550 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 SNCAIPQ9Y6H5 919 aa18.59■□□□□ 0.57
CDCA3-211ENST00000603043 MINDY4BA8MYZ0 360 aa18.58■□□□□ 0.56
CDCA3-211ENST00000603043 SLC10A3P09131 477 aa18.58■□□□□ 0.56
CDCA3-211ENST00000603043 PRKCSHP14314 528 aaPredicted RBP18.58■□□□□ 0.56
CDCA3-211ENST00000603043 VEGFBP49765 207 aa18.58■□□□□ 0.56
CDCA3-211ENST00000603043 GABPAQ06546 454 aa18.58■□□□□ 0.56
CDCA3-211ENST00000603043 NOL9Q5SY16 702 aaKnown RBP18.58■□□□□ 0.56
CDCA3-211ENST00000603043 PCNTO95613 3336 aa18.58■□□□□ 0.56
CDCA3-211ENST00000603043 WDR33Q9C0J8 1336 aaKnown RBP18.57■□□□□ 0.56
CDCA3-211ENST00000603043 SMIM22K7EJ46 135 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 CDC45O75419 566 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 SCYL3Q8IZE3 742 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 DNAJC5GQ8N7S2 189 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 DYNLL2Q96FJ2 89 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 FAM155AB1AL88 458 aaPredicted RBP18.57■□□□□ 0.56
CDCA3-211ENST00000603043 SGSM2O43147 1006 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 ALX1Q15699 326 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 TATDN1Q6P1N9 297 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 CASC1Q6TDU7 716 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 SWAP70Q9UH65 585 aa18.57■□□□□ 0.56
CDCA3-211ENST00000603043 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 ZMYM6O95789 1325 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 FGAP02671 866 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 SHMT1P34896 483 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 CAP2P40123 477 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
CDCA3-211ENST00000603043 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 OPTNQ96CV9 577 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
CDCA3-211ENST00000603043 LAMA4Q16363 1823 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 THSD7BQ9C0I4 1608 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 DSCC1Q9BVC3 393 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 SPDYE5A6NIY4 337 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 GDF11O95390 407 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 PPARAQ07869 468 aa18.55■□□□□ 0.56
CDCA3-211ENST00000603043 MKRN3Q13064 507 aaKnown RBP18.55■□□□□ 0.56
CDCA3-211ENST00000603043 NOGQ13253 232 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms