RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 COPS6Q7L5N1 327 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 BICC1Q9H694 974 aaKnown RBP9.68□□□□□ -0.86
CSMD1-216ENST00000602557 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ACEP12821 1306 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 MYO1CO00159 1063 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 GNAQP50148 359 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 GAS2L3Q86XJ1 694 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ZBTB21Q9ULJ3 1066 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 VWA3AA6NCI4 1184 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 YIPF3Q9GZM5 350 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 TMEM63CQ9P1W3 806 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ATP5DP30049 168 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 PTPDC1A2A3K4 754 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 CPA1P15085 419 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 IDI1Q13907 227 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 SPATS2Q86XZ4 545 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 ARHGAP42A6NI28 874 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 A0A1B0GVL5 298 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 UTP11Q9Y3A2 253 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 SPECC1L-ADORA2AF8WAN1 911 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 TAF11Q15544 211 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 TTC41PQ6P2S7 1318 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 PSMD2Q13200 908 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 ELP1O95163 1332 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 RNF113AO15541 343 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 ATP2A2P16615 1042 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 IL15P40933 162 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 NPHP3Q7Z494 1330 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 MRPL46Q9H2W6 279 aaKnown RBP9.67□□□□□ -0.86
CSMD1-216ENST00000602557 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
CSMD1-216ENST00000602557 HHATQ5VTY9 493 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 CCDC65Q8IXS2 484 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ARHGAP24Q8N264 748 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 CLSTN2Q9H4D0 955 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ARMC9Q7Z3E5 817 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 PPFIA4O75335 1185 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 PAK2Q13177 524 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 DENND2CQ68D51 928 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 LMBR1LQ6UX01 489 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ACSBG1Q96GR2 724 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SYNRGQ9UMZ2 1314 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 A0A087WUV0 522 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ATP8B2P98198 1209 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SMC1BQ8NDV3 1235 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 MAK16Q9BXY0 300 aaKnown RBP9.66□□□□□ -0.86
CSMD1-216ENST00000602557 GOLGA8KD6RF30 607 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 PHLDB3Q6NSJ2 640 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
CSMD1-216ENST00000602557 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KRT79Q5XKE5 535 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 TXNDC16Q9P2K2 825 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 STMN1P16949 149 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SP4Q02446 784 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 TFCP2Q12800 502 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KCTD16Q68DU8 428 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KSR2Q6VAB6 950 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SDCCAG8Q86SQ7 713 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-216ENST00000602557 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 NDC80O14777 642 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KIF1BO60333 1816 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 SEL1L2Q5TEA6 688 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 RUFY4Q6ZNE9 571 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 KRT5P13647 590 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 CYP26C1Q6V0L0 522 aa9.66□□□□□ -0.86
CSMD1-216ENST00000602557 ADGBQ8N7X0 1667 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 DACT3Q96B18 629 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-216ENST00000602557 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 A6NNZ2 444 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 ALDH1L1O75891 902 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 GNAT2P19087 354 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 MYL5Q02045 173 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 ACTN3Q08043 901 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-216ENST00000602557 RAD51AP2Q09MP3 1159 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 TUBB8Q3ZCM7 444 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 HS2ST1Q7LGA3 356 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 MAGEA9P43362 315 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 TUBB2AQ13885 445 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 FAM133BQ5BKY9 247 aaKnown RBP9.65□□□□□ -0.86
CSMD1-216ENST00000602557 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 TUBB2BQ9BVA1 445 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 GRIN2AQ12879 1464 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 INTUQ9ULD6 942 aa9.65□□□□□ -0.86
CSMD1-216ENST00000602557 GNPTABQ3T906 1256 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms