RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 CA12O43570 354 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 TRPA1O75762 1119 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
USE1-209ENST00000601592 LBX1P52954 281 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 LRRFIP1Q32MZ4 808 aaKnown RBP15.44■□□□□ 0.06
USE1-209ENST00000601592 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 SDR42E1Q8WUS8 393 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 PICK1Q9NRD5 415 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 PI4KBQ9UBF8 816 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
USE1-209ENST00000601592 PHIPQ8WWQ0 1821 aa15.43■□□□□ 0.06
USE1-209ENST00000601592 PTPRFP10586 1907 aa15.43■□□□□ 0.06
USE1-209ENST00000601592 RNF113AO15541 343 aaKnown RBP15.43■□□□□ 0.06
USE1-209ENST00000601592 RNF186Q9NXI6 227 aa15.43■□□□□ 0.06
USE1-209ENST00000601592 STAP2Q9UGK3 403 aa15.43■□□□□ 0.06
USE1-209ENST00000601592 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
USE1-209ENST00000601592 POLR3DP05423 398 aaPredicted RBP15.42■□□□□ 0.06
USE1-209ENST00000601592 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
USE1-209ENST00000601592 NOL9Q5SY16 702 aaKnown RBP15.42■□□□□ 0.06
USE1-209ENST00000601592 SCYL3Q8IZE3 742 aa15.42■□□□□ 0.06
USE1-209ENST00000601592 APPBP2Q92624 585 aa15.42■□□□□ 0.06
USE1-209ENST00000601592 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
USE1-209ENST00000601592 MCM9Q9NXL9 1143 aa15.42■□□□□ 0.06
USE1-209ENST00000601592 HERC5Q9UII4 1024 aaKnown RBP15.42■□□□□ 0.06
USE1-209ENST00000601592 CCL15-CCL14A0A0B4J2E2 113 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 TRIM6-TRIM34B2RNG4 842 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 PRKAB2O43741 272 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 TBC1D12O60347 775 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
USE1-209ENST00000601592 NEFLP07196 543 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 TM4SF4P48230 202 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 GTF2A2P52657 109 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 PPIL2Q13356 520 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 CCL15Q16663 113 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 SAGE1Q9NXZ1 904 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
USE1-209ENST00000601592 SLC4A4Q9Y6R1 1079 aa15.41■□□□□ 0.06
USE1-209ENST00000601592 IRF6O14896 467 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 CENPBP07199 599 aaPredicted RBP15.4■□□□□ 0.06
USE1-209ENST00000601592 INHBEP58166 350 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 PPATQ06203 517 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 IFNL1Q8IU54 200 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 PLEKHM2Q8IWE5 1019 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 OSBP2Q969R2 916 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 EVI5LQ96CN4 794 aa15.4■□□□□ 0.06
USE1-209ENST00000601592 DCP1AQ9NPI6 582 aaPredicted RBP15.4■□□□□ 0.06
USE1-209ENST00000601592 M0R2C6 588 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 TBC1D8O95759 1140 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 SNAPC2Q13487 334 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 OTUD7BQ6GQQ9 843 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
USE1-209ENST00000601592 FOXP4Q8IVH2 680 aaPredicted RBP15.39■□□□□ 0.05
USE1-209ENST00000601592 AMOTL1Q8IY63 956 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 MS4A4AQ96JQ5 239 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 DNAJC18Q9H819 358 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 SERPINB13Q9UIV8 391 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 ZHX2Q9Y6X8 837 aa15.39■□□□□ 0.05
USE1-209ENST00000601592 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
USE1-209ENST00000601592 GPAA1O43292 621 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 GDF11O95390 407 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 CYP2D6P10635 497 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 CETPP11597 493 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 PTPRAP18433 802 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 CAP2P40123 477 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 PLCD1P51178 756 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 BRI3BPQ8WY22 251 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 SEC62Q99442 399 aaKnown RBP15.38■□□□□ 0.05
USE1-209ENST00000601592 PRDM10Q9NQV6 1147 aa15.38■□□□□ 0.05
USE1-209ENST00000601592 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
USE1-209ENST00000601592 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
USE1-209ENST00000601592 APPP05067 770 aa15.37■□□□□ 0.05
USE1-209ENST00000601592 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
USE1-209ENST00000601592 COL13A1Q5TAT6 717 aaPredicted RBP15.37■□□□□ 0.05
USE1-209ENST00000601592 STRBPQ96SI9 672 aaKnown RBP15.37■□□□□ 0.05
USE1-209ENST00000601592 EHD4Q9H223 541 aa15.37■□□□□ 0.05
USE1-209ENST00000601592 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
USE1-209ENST00000601592 PDE4AP27815 886 aa15.36■□□□□ 0.05
USE1-209ENST00000601592 EVX2Q03828 476 aa15.36■□□□□ 0.05
USE1-209ENST00000601592 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
USE1-209ENST00000601592 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
USE1-209ENST00000601592 PTPN18Q99952 460 aa15.36■□□□□ 0.05
USE1-209ENST00000601592 CYP2D7A0A087X1C5 515 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 USP17L21D6R901 530 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 ASNSP08243 561 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 GNAT2P19087 354 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 TDO2P48775 406 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 TAF1CQ15572 869 aaPredicted RBP15.35■□□□□ 0.05
USE1-209ENST00000601592 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
USE1-209ENST00000601592 CERKLQ49MI3 558 aaPredicted RBP15.35■□□□□ 0.05
USE1-209ENST00000601592 GADL1Q6ZQY3 521 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 CCDC129Q6ZRS4 1044 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 ZBTB21Q9ULJ3 1066 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms