RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 CNTNAP5Q8WYK1 1306 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 A0A0A0MRY4 1105 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 FBXO24O75426 580 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 ARL4DP49703 201 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 RAC1P63000 192 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 PPP2R3AQ06190 1150 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 C19orf57Q0VDD7 668 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 SV2BQ7L1I2 683 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 DDX54Q8TDD1 881 aaKnown RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 DCAF11Q8TEB1 546 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 SCARF2Q96GP6 870 aaPredicted RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 CARD10Q9BWT7 1032 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 METTL5Q9NRN9 209 aaKnown RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 EID1Q9Y6B2 187 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 LRP5O75197 1615 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 EIF2AK4Q9P2K8 1649 aaKnown RBP6.85□□□□□ -1.31
VRK3-222ENST00000601324 ARHGEF5Q12774 1597 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 EP400Q96L91 3159 aa6.85□□□□□ -1.31
VRK3-222ENST00000601324 TM4SF5O14894 197 aa6.84□□□□□ -1.31
VRK3-222ENST00000601324 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.31
VRK3-222ENST00000601324 IDI1Q13907 227 aa6.84□□□□□ -1.31
VRK3-222ENST00000601324 CCDC85BQ15834 202 aaPredicted RBP6.84□□□□□ -1.31
VRK3-222ENST00000601324 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
VRK3-222ENST00000601324 FBXO11Q86XK2 927 aa6.84□□□□□ -1.31
VRK3-222ENST00000601324 KLHL23Q8NBE8 558 aa6.84□□□□□ -1.31
VRK3-222ENST00000601324 NOC4LQ9BVI4 516 aaKnown RBP6.84□□□□□ -1.31
VRK3-222ENST00000601324 EFCAB6Q5THR3 1501 aa6.84□□□□□ -1.31
VRK3-222ENST00000601324 ZFYVE9O95405 1425 aa6.84□□□□□ -1.32
VRK3-222ENST00000601324 NOS1P29475 1434 aa6.84□□□□□ -1.32
VRK3-222ENST00000601324 CHD2O14647 1828 aaKnown RBP6.83□□□□□ -1.32
VRK3-222ENST00000601324 ENC1O14682 589 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 ZNF76P36508 570 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 ZNF157P51786 506 aaPredicted RBP6.83□□□□□ -1.32
VRK3-222ENST00000601324 FANCCQ00597 558 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 TRIM28Q13263 835 aaKnown RBP6.83□□□□□ -1.32
VRK3-222ENST00000601324 HGSNATQ68CP4 663 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 FMR1NBQ8N0W7 255 aaPredicted RBP6.83□□□□□ -1.32
VRK3-222ENST00000601324 GALNT11Q8NCW6 608 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 CEP152O94986 1710 aa6.83□□□□□ -1.32
VRK3-222ENST00000601324 PNPLA6Q8IY17 1366 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.82□□□□□ -1.32
VRK3-222ENST00000601324 CELA3AP09093 270 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 TCF3P15923 654 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 GSTM4Q03013 218 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 AP3B2Q13367 1082 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 SUZ12Q15022 739 aaKnown RBP6.82□□□□□ -1.32
VRK3-222ENST00000601324 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 KLHDC7BQ96G42 594 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 ATRNO75882 1429 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 ADAMTS13Q76LX8 1427 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 MTUS2Q5JR59 1369 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 PLEKHG1Q9ULL1 1385 aa6.82□□□□□ -1.32
VRK3-222ENST00000601324 BCL9LQ86UU0 1499 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 DLL1O00548 723 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 RLBP1P12271 317 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 ELNP15502 786 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 CD68P34810 354 aaPredicted RBP6.81□□□□□ -1.32
VRK3-222ENST00000601324 FOXD4L6Q3SYB3 417 aaPredicted RBP6.81□□□□□ -1.32
VRK3-222ENST00000601324 FOXD4L3Q6VB84 417 aaPredicted RBP6.81□□□□□ -1.32
VRK3-222ENST00000601324 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 RNF34Q969K3 372 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
VRK3-222ENST00000601324 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 STK17AQ9UEE5 414 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 TBX22Q9Y458 520 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 SAMM50Q9Y512 469 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 LMTK2Q8IWU2 1503 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 ASXL1Q8IXJ9 1541 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 EHBP1L1Q8N3D4 1523 aa6.81□□□□□ -1.32
VRK3-222ENST00000601324 NHSL1Q5SYE7 1610 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 CFAP65Q6ZU64 1925 aaKnown RBP6.8□□□□□ -1.32
VRK3-222ENST00000601324 PAGE1O75459 146 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 CYP11A1P05108 521 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 SPATA31C1P0DKV0 1188 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 NME2P22392 152 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
VRK3-222ENST00000601324 ERMP1Q7Z2K6 904 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 NRSN2Q9GZP1 204 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 ADGRB3O60242 1522 aa6.8□□□□□ -1.32
VRK3-222ENST00000601324 DCCP43146 1447 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 MST1RQ04912 1400 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 PTPRUQ92729 1446 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 ADAM11O75078 769 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 BMP6P22004 513 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 ARNTP27540 789 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 COL8A1P27658 744 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 LIG3P49916 1009 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 NLRP12P59046 1061 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 PCNX4Q63HM2 1172 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 ALYREFQ86V81 257 aaKnown RBP6.79□□□□□ -1.32
VRK3-222ENST00000601324 METTL16Q86W50 562 aaKnown RBP6.79□□□□□ -1.32
VRK3-222ENST00000601324 C8orf37Q96NL8 207 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms