RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 SAP30BPQ9UHR5 308 aaKnown RBP17.25■□□□□ 0.35
PSMC4-205ENST00000601194 HERC5Q9UII4 1024 aaKnown RBP17.25■□□□□ 0.35
PSMC4-205ENST00000601194 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
PSMC4-205ENST00000601194 TRPA1O75762 1119 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 MBD4O95243 580 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 PPIL2Q13356 520 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
PSMC4-205ENST00000601194 MYH7P12883 1935 aa17.23■□□□□ 0.35
PSMC4-205ENST00000601194 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
PSMC4-205ENST00000601194 IRF6O14896 467 aa17.23■□□□□ 0.35
PSMC4-205ENST00000601194 CTNND1O60716 968 aaKnown RBP17.23■□□□□ 0.35
PSMC4-205ENST00000601194 PPATQ06203 517 aa17.23■□□□□ 0.35
PSMC4-205ENST00000601194 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
PSMC4-205ENST00000601194 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
PSMC4-205ENST00000601194 DNAJC18Q9H819 358 aa17.23■□□□□ 0.35
PSMC4-205ENST00000601194 DDX60LQ5H9U9 1706 aaKnown RBP17.23■□□□□ 0.35
PSMC4-205ENST00000601194 RNF113AO15541 343 aaKnown RBP17.22■□□□□ 0.35
PSMC4-205ENST00000601194 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 ZFYP08048 801 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-205ENST00000601194 GTF2A2P52657 109 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
PSMC4-205ENST00000601194 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-205ENST00000601194 FOXP4Q8IVH2 680 aaPredicted RBP17.22■□□□□ 0.35
PSMC4-205ENST00000601194 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 BRI3BPQ8WY22 251 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 APPBP2Q92624 585 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 PTPN18Q99952 460 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
PSMC4-205ENST00000601194 PRKAB2O43741 272 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 PTPRAP18433 802 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 SNAPC2Q13487 334 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
PSMC4-205ENST00000601194 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-205ENST00000601194 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 EHD4Q9H223 541 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
PSMC4-205ENST00000601194 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
PSMC4-205ENST00000601194 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 ALDH1A1P00352 501 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 CAP2P40123 477 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 CCL15Q16663 113 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 FSD1Q9BTV5 496 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
PSMC4-205ENST00000601194 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
PSMC4-205ENST00000601194 NAV1Q8NEY1 1877 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 TBC1D8O95759 1140 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 CETPP11597 493 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 PLCD1P51178 756 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 EVI5LQ96CN4 794 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
PSMC4-205ENST00000601194 TRIM34Q9BYJ4 488 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 MCM9Q9NXL9 1143 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 SERPINB13Q9UIV8 391 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 MYH1P12882 1939 aa17.19■□□□□ 0.34
PSMC4-205ENST00000601194 M0R2C6 588 aa17.18■□□□□ 0.34
PSMC4-205ENST00000601194 CXCL11O14625 94 aa17.18■□□□□ 0.34
PSMC4-205ENST00000601194 POLR3DP05423 398 aaPredicted RBP17.18■□□□□ 0.34
PSMC4-205ENST00000601194 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
PSMC4-205ENST00000601194 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
PSMC4-205ENST00000601194 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
PSMC4-205ENST00000601194 GPAA1O43292 621 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 JAG1P78504 1218 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 EVX2Q03828 476 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 GABPAQ06546 454 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 MOGSQ13724 837 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-205ENST00000601194 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
PSMC4-205ENST00000601194 BTBD19C9JJ37 291 aa17.16■□□□□ 0.34
PSMC4-205ENST00000601194 CYP2D6P10635 497 aa17.16■□□□□ 0.34
PSMC4-205ENST00000601194 PDE4AP27815 886 aa17.16■□□□□ 0.34
PSMC4-205ENST00000601194 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
PSMC4-205ENST00000601194 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
PSMC4-205ENST00000601194 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-205ENST00000601194 GSG1L2A8MUP6 293 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 GDF11O95390 407 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 ASNSP08243 561 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 SHMT1P34896 483 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 CRHR2Q13324 411 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-205ENST00000601194 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 ZCCHC17Q9NP64 241 aaKnown RBP17.15■□□□□ 0.34
PSMC4-205ENST00000601194 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 ZBTB21Q9ULJ3 1066 aa17.15■□□□□ 0.34
PSMC4-205ENST00000601194 PHIPQ8WWQ0 1821 aa17.14■□□□□ 0.34
PSMC4-205ENST00000601194 CYP2D7A0A087X1C5 515 aa17.14■□□□□ 0.33
PSMC4-205ENST00000601194 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms