RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
SMG9-211ENST00000601170 UBASH3AP57075 661 aa16.64■□□□□ 0.25
SMG9-211ENST00000601170 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
SMG9-211ENST00000601170 INTS5Q6P9B9 1019 aaKnown RBP16.64■□□□□ 0.25
SMG9-211ENST00000601170 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
SMG9-211ENST00000601170 CMTR1Q8N1G2 835 aaKnown RBP16.64■□□□□ 0.25
SMG9-211ENST00000601170 PCDHA5Q9Y5H7 936 aa16.64■□□□□ 0.25
SMG9-211ENST00000601170 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
SMG9-211ENST00000601170 KCNJ6P48051 423 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 CCDC87Q9NVE4 849 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 LRP2BPQ9P2M1 347 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 CGNQ9P2M7 1197 aaKnown RBP16.63■□□□□ 0.25
SMG9-211ENST00000601170 A0A0G2JS52 829 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 FOXN1O15353 648 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 DEXIO95424 95 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
SMG9-211ENST00000601170 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
SMG9-211ENST00000601170 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
SMG9-211ENST00000601170 GRIN1Q05586 938 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 NUP133Q8WUM0 1156 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
SMG9-211ENST00000601170 LAMB2P55268 1798 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 CHRNDQ07001 517 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 PARP10Q53GL7 1025 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
SMG9-211ENST00000601170 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
SMG9-211ENST00000601170 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
SMG9-211ENST00000601170 FBXO2Q9UK22 296 aaPredicted RBP16.62■□□□□ 0.25
SMG9-211ENST00000601170 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 BMP6P22004 513 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 PTPREP23469 700 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 MDM2Q00987 491 aaPredicted RBP16.61■□□□□ 0.25
SMG9-211ENST00000601170 PPARAQ07869 468 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 NR5A1Q13285 461 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 ADGRA1Q86SQ6 560 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 TMTC2Q8N394 836 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 FEZ1Q99689 392 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 MTA3Q9BTC8 594 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMG9-211ENST00000601170 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
SMG9-211ENST00000601170 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
SMG9-211ENST00000601170 MYH6P13533 1939 aa16.61■□□□□ 0.25
SMG9-211ENST00000601170 NTSR2O95665 410 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 CYP7A1P22680 504 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 PDE4BQ07343 736 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
SMG9-211ENST00000601170 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 SDR42E1Q8WUS8 393 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 ERO1AQ96HE7 468 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 HOOK1Q9UJC3 728 aaKnown RBP16.6■□□□□ 0.25
SMG9-211ENST00000601170 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMG9-211ENST00000601170 PCDHB6Q9Y5E3 794 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
SMG9-211ENST00000601170 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 POSTNQ15063 836 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 SYT10Q6XYQ8 523 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 COL4A1P02462 1669 aa16.6■□□□□ 0.25
SMG9-211ENST00000601170 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 POLR2DO15514 142 aaKnown RBP16.59■□□□□ 0.25
SMG9-211ENST00000601170 MYO1BO43795 1136 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
SMG9-211ENST00000601170 RCAN1P53805 252 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 VSTM4Q8IW00 320 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 MAN1B1Q9UKM7 699 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
SMG9-211ENST00000601170 PTPN21Q16825 1174 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 OXER1Q8TDS5 423 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 ABCF2Q9UG63 623 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 TNKSO95271 1327 aa16.59■□□□□ 0.25
SMG9-211ENST00000601170 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.25
SMG9-211ENST00000601170 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.25
SMG9-211ENST00000601170 PRR29P0C7W0 189 aa16.58■□□□□ 0.25
SMG9-211ENST00000601170 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.25
SMG9-211ENST00000601170 RREB1Q92766 1687 aa16.58■□□□□ 0.25
SMG9-211ENST00000601170 SMIM22K7EJ46 135 aa16.58■□□□□ 0.24
SMG9-211ENST00000601170 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
SMG9-211ENST00000601170 ATP2B1P20020 1258 aa16.58■□□□□ 0.24
SMG9-211ENST00000601170 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 MAGEB6P1A0A0J9YX57 407 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 SIK1P57059 783 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 GOLGA8FQ08AF8 430 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 GOLGA8DPQ0D2H9 430 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 SEC23AQ15436 765 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 ELF2Q15723 593 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 HSP90AA4PQ58FG1 418 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 ESR2Q92731 530 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 L2HGDHQ9H9P8 463 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
SMG9-211ENST00000601170 RAI14Q9P0K7 980 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms