RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CHGBP05060 677 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 GNAT2P19087 354 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 BTDP43251 543 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 RHBDL3P58872 404 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 CRHR2Q13324 411 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 CD99L2Q8TCZ2 262 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 FAM227BQ96M60 508 aa13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 NOL10Q9BSC4 688 aaKnown RBP13.97□□□□□ -0.17
CHMP2A-207ENST00000600804 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 GPAA1O43292 621 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 EPB41L2O43491 1005 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 ALDH1A1P00352 501 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 IDI2Q9BXS1 227 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 PTPN22Q9Y2R2 807 aa13.96□□□□□ -0.17
CHMP2A-207ENST00000600804 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 M0R2C6 588 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 MYO1BO43795 1136 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 INHBEP58166 350 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 SLFNL1Q499Z3 407 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 MIGA1Q8NAN2 632 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 TEPSINQ96N21 525 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 ESYT1Q9BSJ8 1104 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 VEZTQ9HBM0 779 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 PPP2R3BQ9Y5P8 575 aa13.95□□□□□ -0.18
CHMP2A-207ENST00000600804 ZMYM6O95789 1325 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 COL2A1P02458 1487 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 MBD4O95243 580 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 RASA3Q14644 834 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 LCORLQ8N3X6 602 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 ARMC5Q96C12 935 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 ATP8A2Q9NTI2 1148 aa13.94□□□□□ -0.18
CHMP2A-207ENST00000600804 WDHD1O75717 1129 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 DYNLL1P63167 89 aaKnown RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 ALX1Q15699 326 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 C8orf34Q49A92 452 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 ZNF589Q86UQ0 364 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 FAM83AQ86UY5 434 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 DSCC1Q9BVC3 393 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 USP40Q9NVE5 1235 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 ZNF70Q9UC06 446 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 PTPRFP10586 1907 aa13.93□□□□□ -0.18
CHMP2A-207ENST00000600804 MYH1P12882 1939 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 ENTPD3O75355 529 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 TNFAIP1Q13829 316 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 TEX11Q8IYF3 940 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 BRI3BPQ8WY22 251 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 ERO1AQ96HE7 468 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 IL25Q9H293 177 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 TDRD3Q9H7E2 651 aaKnown RBP13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 ARMT1Q9H993 441 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 TMOD2Q9NZR1 351 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 TAOK2Q9UL54 1235 aa13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 DDX60LQ5H9U9 1706 aaKnown RBP13.92□□□□□ -0.18
CHMP2A-207ENST00000600804 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 REC8O95072 547 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 EFCC1Q9HA90 598 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 DCP1AQ9NPI6 582 aaPredicted RBP13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 ATRNL1Q5VV63 1379 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 BAZ2AQ9UIF9 1905 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
CHMP2A-207ENST00000600804 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 FOXP2O15409 715 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 SP3Q02447 781 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 SBK1Q52WX2 424 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 FAM151AQ8WW52 585 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 MAP4K1Q92918 833 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-207ENST00000600804 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms