RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 HPS5Q9UPZ3 1129 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 ZHX2Q9Y6X8 837 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 ZSWIM8A7E2V4 1837 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 CXCL11O14625 94 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 PTPRAP18433 802 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
IRF3-224ENST00000599680 ANKRD23Q86SG2 305 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
IRF3-224ENST00000599680 MIGA1Q8NAN2 632 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
IRF3-224ENST00000599680 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 FLT1P17948 1338 aa17.41■□□□□ 0.38
IRF3-224ENST00000599680 PDHXO00330 501 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 GOLIM4O00461 696 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 HLA-DOAP06340 250 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 USP5P45974 858 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 KIF22Q14807 665 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 OTOP1Q7RTM1 612 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
IRF3-224ENST00000599680 TLR2O60603 784 aa17.39■□□□□ 0.37
IRF3-224ENST00000599680 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
IRF3-224ENST00000599680 FASTKD5Q7L8L6 764 aaKnown RBP17.39■□□□□ 0.37
IRF3-224ENST00000599680 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
IRF3-224ENST00000599680 TRIM75PA6NK02 468 aa17.38■□□□□ 0.37
IRF3-224ENST00000599680 SLC9C2Q5TAH2 1124 aa17.38■□□□□ 0.37
IRF3-224ENST00000599680 PAG1Q9NWQ8 432 aa17.38■□□□□ 0.37
IRF3-224ENST00000599680 PALD1Q9ULE6 856 aa17.38■□□□□ 0.37
IRF3-224ENST00000599680 AFG3L2Q9Y4W6 797 aa17.38■□□□□ 0.37
IRF3-224ENST00000599680 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
IRF3-224ENST00000599680 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
IRF3-224ENST00000599680 A0A0G2JLL6 359 aaPredicted RBP17.37■□□□□ 0.37
IRF3-224ENST00000599680 MAGEB6P1A0A0J9YX57 407 aa17.37■□□□□ 0.37
IRF3-224ENST00000599680 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
IRF3-224ENST00000599680 ATP5JP18859 108 aa17.37■□□□□ 0.37
IRF3-224ENST00000599680 CAP2P40123 477 aa17.37■□□□□ 0.37
IRF3-224ENST00000599680 SLC4A8Q2Y0W8 1093 aa17.37■□□□□ 0.37
IRF3-224ENST00000599680 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
IRF3-224ENST00000599680 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
IRF3-224ENST00000599680 PARK7Q99497 189 aaKnown RBP17.37■□□□□ 0.37
IRF3-224ENST00000599680 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
IRF3-224ENST00000599680 PDE6AP16499 860 aa17.36■□□□□ 0.37
IRF3-224ENST00000599680 SOX10P56693 466 aa17.36■□□□□ 0.37
IRF3-224ENST00000599680 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
IRF3-224ENST00000599680 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
IRF3-224ENST00000599680 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
IRF3-224ENST00000599680 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
IRF3-224ENST00000599680 CRNKL1Q9BZJ0 848 aaKnown RBP17.36■□□□□ 0.37
IRF3-224ENST00000599680 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.374e-7■■■□□ 16.7
IRF3-224ENST00000599680 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
IRF3-224ENST00000599680 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
IRF3-224ENST00000599680 USP17L5A8MUK1 530 aa17.35■□□□□ 0.37
IRF3-224ENST00000599680 MOGSQ13724 837 aa17.35■□□□□ 0.37
IRF3-224ENST00000599680 CPA4Q9UI42 421 aa17.35■□□□□ 0.37
IRF3-224ENST00000599680 PTPN22Q9Y2R2 807 aa17.35■□□□□ 0.37
IRF3-224ENST00000599680 ZNF532Q9HCE3 1301 aa17.35■□□□□ 0.37
IRF3-224ENST00000599680 RBBP6Q7Z6E9 1792 aaKnown RBP17.35■□□□□ 0.37
IRF3-224ENST00000599680 ASNSP08243 561 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 LACTBP83111 547 aaPredicted RBP17.34■□□□□ 0.37
IRF3-224ENST00000599680 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 ZNF280CQ8ND82 737 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 EDC3Q96F86 508 aaKnown RBP17.34■□□□□ 0.37
IRF3-224ENST00000599680 HAUS7Q99871 368 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
IRF3-224ENST00000599680 ECM2O94769 699 aaPredicted RBP17.33■□□□□ 0.36
IRF3-224ENST00000599680 RGS19P49795 217 aa17.33■□□□□ 0.36
IRF3-224ENST00000599680 SPP2Q13103 211 aa17.33■□□□□ 0.36
IRF3-224ENST00000599680 C17orf99Q6UX52 265 aa17.33■□□□□ 0.36
IRF3-224ENST00000599680 SMCR8Q8TEV9 937 aaPredicted RBP17.33■□□□□ 0.36
IRF3-224ENST00000599680 GDF11O95390 407 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
IRF3-224ENST00000599680 CYP2C8P10632 490 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 PROCA1Q8NCQ7 364 aaPredicted RBP17.32■□□□□ 0.36
IRF3-224ENST00000599680 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
IRF3-224ENST00000599680 ECHDC1Q9NTX5 307 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
IRF3-224ENST00000599680 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 AGTPBP1Q9UPW5 1226 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
IRF3-224ENST00000599680 GNRH1P01148 92 aa17.31■□□□□ 0.36
IRF3-224ENST00000599680 HMGCS2P54868 508 aa17.31■□□□□ 0.36
IRF3-224ENST00000599680 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.362e-8■■■□□ 17.9
IRF3-224ENST00000599680 RRP1BQ14684 758 aaKnown RBP17.31■□□□□ 0.36
IRF3-224ENST00000599680 METTL16Q86W50 562 aaKnown RBP17.31■□□□□ 0.36
IRF3-224ENST00000599680 CRBNQ96SW2 442 aa17.31■□□□□ 0.36
IRF3-224ENST00000599680 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
IRF3-224ENST00000599680 SERPINB13Q9UIV8 391 aa17.31■□□□□ 0.36
IRF3-224ENST00000599680 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
IRF3-224ENST00000599680 ADD2P35612 726 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 PSMC4P43686 418 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 SLC9C1Q4G0N8 1177 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 ARHGAP39Q9C0H5 1083 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms