RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 TOP6BLQ8N6T0 577 aa10.4□□□□□ -0.74
LINC00343-208ENST00000599264 DUSP9Q99956 384 aaKnown RBP10.4□□□□□ -0.74
LINC00343-208ENST00000599264 MRC2Q9UBG0 1479 aa10.4□□□□□ -0.74
LINC00343-208ENST00000599264 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
LINC00343-208ENST00000599264 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
LINC00343-208ENST00000599264 LEFTY1O75610 366 aa10.38□□□□□ -0.75
LINC00343-208ENST00000599264 HDXQ7Z353 690 aa10.38□□□□□ -0.75
LINC00343-208ENST00000599264 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
LINC00343-208ENST00000599264 BCL7CQ8WUZ0 217 aaPredicted RBP10.38□□□□□ -0.75
LINC00343-208ENST00000599264 PAK6Q9NQU5 681 aaPredicted RBP10.38□□□□□ -0.75
LINC00343-208ENST00000599264 GTF2IRD1Q9UHL9 959 aa10.38□□□□□ -0.75
LINC00343-208ENST00000599264 TXKP42681 527 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 RING1Q06587 406 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
LINC00343-208ENST00000599264 ZBTB37Q5TC79 503 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 FAM181AQ8N9Y4 354 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
LINC00343-208ENST00000599264 RPS26P62854 115 aaKnown RBP10.36□□□□□ -0.75
LINC00343-208ENST00000599264 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
LINC00343-208ENST00000599264 PLD6Q8N2A8 252 aaKnown RBP10.36□□□□□ -0.75
LINC00343-208ENST00000599264 VAV3Q9UKW4 847 aa10.36□□□□□ -0.75
LINC00343-208ENST00000599264 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
LINC00343-208ENST00000599264 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
LINC00343-208ENST00000599264 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
LINC00343-208ENST00000599264 DIEXFQ68CQ4 756 aaKnown RBP10.35□□□□□ -0.75
LINC00343-208ENST00000599264 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
LINC00343-208ENST00000599264 PRAMEF27A3QJZ7 478 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 CEACAM5P06731 702 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 RLBP1P12271 317 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 NTF4P34130 210 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 PRKCQQ04759 706 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 PSMD2Q13200 908 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 HRASLS5Q96KN8 279 aa10.34□□□□□ -0.75
LINC00343-208ENST00000599264 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 LRIG2O94898 1065 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 OXCT1P55809 520 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 PLCL1Q15111 1095 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 LRFN4Q6PJG9 635 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 PLPPR2Q96GM1 343 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 PARP2Q9UGN5 583 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 RNF114Q9Y508 228 aa10.33□□□□□ -0.76
LINC00343-208ENST00000599264 IGF2BP3O00425 579 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC00343-208ENST00000599264 ITGAEP38570 1179 aa10.32□□□□□ -0.76
LINC00343-208ENST00000599264 INPP5AQ14642 412 aa10.32□□□□□ -0.76
LINC00343-208ENST00000599264 CBLL1Q75N03 491 aa10.32□□□□□ -0.76
LINC00343-208ENST00000599264 CYFIP1Q7L576 1253 aa10.32□□□□□ -0.76
LINC00343-208ENST00000599264 SNX11Q9Y5W9 270 aa10.32□□□□□ -0.76
LINC00343-208ENST00000599264 ITIH2P19823 946 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 ETF1P62495 437 aaKnown RBP10.31□□□□□ -0.76
LINC00343-208ENST00000599264 BNIP3Q12983 259 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 AOC3Q16853 763 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 ARMCX6Q7L4S7 300 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 NPAS4Q8IUM7 802 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 GAL3ST3Q96A11 431 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 WNT10AQ9GZT5 417 aa10.31□□□□□ -0.76
LINC00343-208ENST00000599264 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
LINC00343-208ENST00000599264 ERCC3P19447 782 aa10.3□□□□□ -0.76
LINC00343-208ENST00000599264 DAB2P98082 770 aa10.3□□□□□ -0.76
LINC00343-208ENST00000599264 PTPN11Q06124 597 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-208ENST00000599264 WIPI1Q5MNZ9 446 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-208ENST00000599264 ZNF574Q6ZN55 896 aaPredicted RBP10.3□□□□□ -0.76
LINC00343-208ENST00000599264 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
LINC00343-208ENST00000599264 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 JUNBP17275 347 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-208ENST00000599264 LIG3P49916 1009 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 TAF1CQ15572 869 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-208ENST00000599264 DNAJC14Q6Y2X3 702 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-208ENST00000599264 AGMOQ6ZNB7 445 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 HID1Q8IV36 788 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 ASIC4Q96FT7 647 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 HEXIM2Q96MH2 286 aaKnown RBP10.29□□□□□ -0.76
LINC00343-208ENST00000599264 MIR1-1HGQ9H1L0 117 aa10.29□□□□□ -0.76
LINC00343-208ENST00000599264 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
LINC00343-208ENST00000599264 BIN1O00499 593 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 ST13P50502 369 aaKnown RBP10.28□□□□□ -0.76
LINC00343-208ENST00000599264 MAP3K11Q16584 847 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 UBE3DQ7Z6J8 389 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 MFSD2AQ8NA29 543 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
LINC00343-208ENST00000599264 KRTAP9-2Q9BYQ4 174 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 FOXQ1Q9C009 403 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 RNF19AQ9NV58 838 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 TACC3Q9Y6A5 838 aa10.28□□□□□ -0.76
LINC00343-208ENST00000599264 CD8BP10966 210 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 FUT4P22083 530 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-208ENST00000599264 FAM214BQ7L5A3 538 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 TMC4Q7Z404 712 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 ASB11Q8WXH4 323 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 TNKS2Q9H2K2 1166 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 PLAGL2Q9UPG8 496 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 MAPK8IP1Q9UQF2 711 aa10.27□□□□□ -0.77
LINC00343-208ENST00000599264 CAP2P40123 477 aa10.26□□□□□ -0.77
LINC00343-208ENST00000599264 SEPT6Q14141 434 aa10.26□□□□□ -0.77
LINC00343-208ENST00000599264 CCDC27Q2M243 656 aa10.26□□□□□ -0.77
LINC00343-208ENST00000599264 ZNF792Q3KQV3 632 aa10.26□□□□□ -0.77
LINC00343-208ENST00000599264 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
LINC00343-208ENST00000599264 ANGEL2Q5VTE6 544 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms