RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 K7ELQ4 463 aaPredicted RBP24.74■■□□□ 1.55
COPE-208ENST00000598969 RPS6KB1P23443 525 aa24.74■■□□□ 1.55
COPE-208ENST00000598969 TTC6Q86TZ1 520 aa24.74■■□□□ 1.55
COPE-208ENST00000598969 MB21D2Q8IYB1 491 aaPredicted RBP24.74■■□□□ 1.55
COPE-208ENST00000598969 FAM151AQ8WW52 585 aa24.74■■□□□ 1.55
COPE-208ENST00000598969 RNF41Q9H4P4 317 aaPredicted RBP24.74■■□□□ 1.55
COPE-208ENST00000598969 CYP46A1Q9Y6A2 500 aa24.74■■□□□ 1.55
COPE-208ENST00000598969 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
COPE-208ENST00000598969 FAM83AQ86UY5 434 aa24.73■■□□□ 1.55
COPE-208ENST00000598969 TTC14Q96N46 770 aa24.73■■□□□ 1.55
COPE-208ENST00000598969 DHX36Q9H2U1 1008 aaKnown RBP24.73■■□□□ 1.55
COPE-208ENST00000598969 POTECB2RU33 542 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 B4E1Z4 1266 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 CD2BP2O95400 341 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 SLC3A2P08195 630 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 HMGB1P09429 215 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 MCM2P49736 904 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 SCAF8Q9UPN6 1271 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 SIPA1L1O43166 1804 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 WDR90Q96KV7 1748 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 PRDM1O75626 825 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 PCP11498 1178 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 EXOSC10Q01780 885 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 GABPAQ06546 454 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 TRDNQ13061 729 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 C16orf86Q6ZW13 317 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 RALYLQ86SE5 291 aaKnown RBP24.72■■□□□ 1.55
COPE-208ENST00000598969 SLC44A5Q8NCS7 719 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 TCEANC2Q96MN5 208 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 CNNM2Q9H8M5 875 aa24.72■■□□□ 1.55
COPE-208ENST00000598969 ORC4O43929 436 aa24.71■■□□□ 1.55
COPE-208ENST00000598969 HLA-DOAP06340 250 aa24.71■■□□□ 1.55
COPE-208ENST00000598969 ANGEL2Q5VTE6 544 aaKnown RBP24.71■■□□□ 1.55
COPE-208ENST00000598969 DHX32Q7L7V1 743 aaKnown RBP24.71■■□□□ 1.55
COPE-208ENST00000598969 ZSCAN29Q8IWY8 852 aaPredicted RBP24.71■■□□□ 1.55
COPE-208ENST00000598969 KRT23Q9C075 422 aa24.71■■□□□ 1.55
COPE-208ENST00000598969 TMEM39BQ9GZU3 492 aa24.71■■□□□ 1.55
COPE-208ENST00000598969 PGAP2Q9UHJ9 254 aa24.71■■□□□ 1.55
COPE-208ENST00000598969 ANTXR2P58335 489 aa24.7■■□□□ 1.55
COPE-208ENST00000598969 PDE4BQ07343 736 aa24.7■■□□□ 1.55
COPE-208ENST00000598969 CYB5R4Q7L1T6 521 aa24.7■■□□□ 1.55
COPE-208ENST00000598969 PDRG1Q9NUG6 133 aa24.7■■□□□ 1.55
COPE-208ENST00000598969 SLURP2P0DP57 97 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 EPHX2P34913 555 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 CDK8P49336 464 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 RRP12Q5JTH9 1297 aaKnown RBP24.7■■□□□ 1.54
COPE-208ENST00000598969 EHD4Q9H223 541 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 TOMM22Q9NS69 142 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 GGA3Q9NZ52 723 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 SERPINB13Q9UIV8 391 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 SCN4AP35499 1836 aa24.7■■□□□ 1.54
COPE-208ENST00000598969 KDM4AO75164 1064 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 TNFAIP1Q13829 316 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 RASA3Q14644 834 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 CHST3Q7LGC8 479 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 CDAN1Q8IWY9 1227 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 ZSWIM5Q9P217 1185 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 PI4KBQ9UBF8 816 aa24.69■■□□□ 1.54
COPE-208ENST00000598969 HSP90AA1P07900 732 aaKnown RBP24.68■■□□□ 1.54
COPE-208ENST00000598969 TNNI2P48788 182 aa24.68■■□□□ 1.54
COPE-208ENST00000598969 DNAJC18Q9H819 358 aa24.68■■□□□ 1.54
COPE-208ENST00000598969 MCM5P33992 734 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 USP50Q70EL3 339 aaPredicted RBP24.67■■□□□ 1.54
COPE-208ENST00000598969 METTL16Q86W50 562 aaKnown RBP24.67■■□□□ 1.54
COPE-208ENST00000598969 CSRNP1Q96S65 589 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 LRRC2Q9BYS8 371 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 ALDH8A1Q9H2A2 487 aaPredicted RBP24.67■■□□□ 1.54
COPE-208ENST00000598969 TAF1DQ9H5J8 278 aaPredicted RBP24.67■■□□□ 1.54
COPE-208ENST00000598969 IQCA1LA6NCM1 817 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 PRC1O43663 620 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 AK2P54819 239 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 APOBEC3FQ8IUX4 373 aaKnown RBP24.67■■□□□ 1.54
COPE-208ENST00000598969 ESR2Q92731 530 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 TEPSINQ96N21 525 aa24.67■■□□□ 1.54
COPE-208ENST00000598969 WDR19Q8NEZ3 1342 aa24.66■■□□□ 1.54
COPE-208ENST00000598969 RASA1P20936 1047 aa24.66■■□□□ 1.54
COPE-208ENST00000598969 FOXP4Q8IVH2 680 aaPredicted RBP24.66■■□□□ 1.54
COPE-208ENST00000598969 DEFB129Q9H1M3 183 aa24.66■■□□□ 1.54
COPE-208ENST00000598969 MKNK2Q9HBH9 465 aa24.66■■□□□ 1.54
COPE-208ENST00000598969 PITPNM2Q9BZ72 1349 aa24.66■■□□□ 1.54
COPE-208ENST00000598969 RANBP6O60518 1105 aaKnown RBP24.65■■□□□ 1.54
COPE-208ENST00000598969 SHMT1P34896 483 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 TOB2Q14106 344 aaPredicted RBP24.65■■□□□ 1.54
COPE-208ENST00000598969 Q6ZUG5 572 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 SWAP70Q9UH65 585 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 FAM196BA6NMK8 535 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 FAM47AQ5JRC9 791 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 AGXT2Q9BYV1 514 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 ZNF287Q9HBT7 754 aa24.65■■□□□ 1.54
COPE-208ENST00000598969 GPHNQ9NQX3 736 aaPredicted RBP24.65■■□□□ 1.54
COPE-208ENST00000598969 SPRYD3Q8NCJ5 442 aa24.64■■□□□ 1.53
COPE-208ENST00000598969 SLKQ9H2G2 1235 aaPredicted RBP24.64■■□□□ 1.53
COPE-208ENST00000598969 CRACR2BQ8N4Y2 399 aaPredicted RBP24.63■■□□□ 1.53
COPE-208ENST00000598969 TAOK2Q9UL54 1235 aa24.63■■□□□ 1.53
COPE-208ENST00000598969 NT5C2P49902 561 aa24.62■■□□□ 1.53
COPE-208ENST00000598969 ZNF444Q8N0Y2 327 aaPredicted RBP24.62■■□□□ 1.53
COPE-208ENST00000598969 FBXL16Q8N461 479 aa24.62■■□□□ 1.53
COPE-208ENST00000598969 IGDCC4Q8TDY8 1250 aa24.62■■□□□ 1.53
COPE-208ENST00000598969 LARP6Q9BRS8 491 aaKnown RBP24.62■■□□□ 1.53
COPE-208ENST00000598969 POLR2AP24928 1970 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms