RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 TGFBRAP1Q8WUH2 860 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 EXOC6BQ9Y2D4 811 aa10.84□□□□□ -0.67
ARHGEF1-215ENST00000598444 BRCA2P51587 3418 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 FMNL1O95466 1100 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 CYP2C8P10632 490 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 ADGRA1Q86SQ6 560 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 CCDC84Q86UT8 332 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 ZNF333Q96JL9 665 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 PARK7Q99497 189 aaKnown RBP10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 PIH1D3Q9NQM4 214 aaKnown RBP10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 ADGRA2Q96PE1 1338 aa10.83□□□□□ -0.68
ARHGEF1-215ENST00000598444 COL2A1P02458 1487 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 IGSF3O75054 1194 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 IDH1O75874 414 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 MYCP01106 439 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 EN2P19622 333 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 CYP7A1P22680 504 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 HOXD10P28358 340 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 CTGFP29279 349 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 CAP2P40123 477 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 PRMT2P55345 433 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 DYNLL1P63167 89 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 SPP2Q13103 211 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 HSP90AB4PQ58FF6 505 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 AACSQ86V21 672 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 MAPKAPK5Q8IW41 473 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 SH3TC2Q8TF17 1288 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 DHX36Q9H2U1 1008 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 PI4KBQ9UBF8 816 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 SRRDQ9UH36 339 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 HERC5Q9UII4 1024 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 NDUFB9Q9Y6M9 179 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 MYH7P12883 1935 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 MYH8P13535 1937 aa10.82□□□□□ -0.68
ARHGEF1-215ENST00000598444 LOC285556D6RIA3 1793 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 APBB1O00213 710 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 BCRP11274 1271 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 OSBPP22059 807 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 SLC4A8Q2Y0W8 1093 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 FOXP4Q8IVH2 680 aaPredicted RBP10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 CRACR2BQ8N4Y2 399 aaPredicted RBP10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 ZNF280CQ8ND82 737 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 BCL11AQ9H165 835 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 SAP30BPQ9UHR5 308 aaKnown RBP10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 PALD1Q9ULE6 856 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 DDX19BQ9UMR2 479 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
ARHGEF1-215ENST00000598444 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 HMMRO75330 724 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 MAP3K12Q12852 859 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 MAGEB6Q8N7X4 407 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 MIGA1Q8NAN2 632 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 RAET1EQ8TD07 263 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 SMCR8Q8TEV9 937 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 TBC1D2Q9BYX2 928 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 ANTXR1Q9H6X2 564 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 ZBTB40Q9NUA8 1239 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 AGTPBP1Q9UPW5 1226 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 FLT1P17948 1338 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
ARHGEF1-215ENST00000598444 USP5P45974 858 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 HMGCS2P54868 508 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 FCGRTP55899 365 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 TREML2Q5T2D2 321 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 PRPF38BQ5VTL8 546 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 METTL16Q86W50 562 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 SIRT2Q8IXJ6 389 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 KIF1BPQ96EK5 621 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 CHMP4BQ9H444 224 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 AS3MTQ9HBK9 375 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 BIN2Q9UBW5 565 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 BAZ2AQ9UIF9 1905 aaKnown RBP10.79□□□□□ -0.68
ARHGEF1-215ENST00000598444 HLA-DOAP06340 250 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 ASNSP08243 561 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 GRK4P32298 578 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 JAG1P78504 1218 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 PABPC4Q13310 644 aaKnown RBP eCLIP10.78□□□□□ -0.686e-8■■■□□ 19
ARHGEF1-215ENST00000598444 CERS3Q8IU89 383 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 ANKRD13CQ8N6S4 541 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 WDR18Q9BV38 432 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 GABRQQ9UN88 632 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 NAV1Q8NEY1 1877 aa10.78□□□□□ -0.68
ARHGEF1-215ENST00000598444 RAB11FIP3O75154 756 aa10.77□□□□□ -0.69
ARHGEF1-215ENST00000598444 GDF11O95390 407 aa10.77□□□□□ -0.69
ARHGEF1-215ENST00000598444 PRKCZQ05513 592 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms