RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, human

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-208	ENST00000598362	FKBP1C	Q5VVH2	108 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CHRDL2	Q6WN34	429 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FAM83A	Q86UY5	434 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SKAP1	Q86WV1	359 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CDAN1	Q8IWY9	1227 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TEX11	Q8IYF3	940 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	DPF3	Q92784	378 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	EVI5L	Q96CN4	794 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	RIOK1	Q9BRS2	568 aa	Known RBP	9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	IDI2	Q9BXS1	227 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	DDX4	Q9NQI0	724 aa	Known RBP	9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FAM198A	Q9UFP1	575 aa		9.08	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FLT1	P17948	1338 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	RBBP6	Q7Z6E9	1792 aa	Known RBP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	MAGEB6P1	A0A0J9YX57	407 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	IGF2BP3	O00425	579 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	RNF113A	O15541	343 aa	Known RBP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ENTPD3	O75355	529 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	MBD4	O95243	580 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZFY	P08048	801 aa	Predicted RBP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PLCG2	P16885	1265 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CRHR2	Q13324	411 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SUPT20HL1	Q3ZLR7	823 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CERS3	Q8IU89	383 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	LCORL	Q8N3X6	602 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	APPBP2	Q92624	585 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	WNK4	Q96J92	1243 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TEPSIN	Q96N21	525 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TMEM39B	Q9GZU3	492 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	RBM27	Q9P2N5	1060 aa	Known RBP	9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	AK9	Q5TCS8	1911 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TRIOBP	Q9H2D6	2365 aa		9.07	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	OTOF	Q9HC10	1997 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SIPA1L1	O43166	1804 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TESPA1	A2RU30	521 aa	Predicted RBP	9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362		M0R2C6	588 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	NPM3	O75607	178 aa	Known RBP	9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TCP10	Q12799	353 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	MAPKAPK5	Q8IW41	473 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	NKX2-3	Q8TAU0	364 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FAM151A	Q8WW52	585 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	RILPL2	Q969X0	211 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PUS7L	Q9H0K6	701 aa	Known RBP	9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ARMT1	Q9H993	441 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	NR2E3	Q9Y5X4	410 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ATRNL1	Q5VV63	1379 aa		9.06	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	LAMB1	P07942	1786 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362		A0A1W2PPC1	479 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	GNRH1	P01148	92 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	USP5	P45974	858 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	IREB2	P48200	963 aa	Known RBP	9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	KIF22	Q14807	665 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	NBPF12	Q5TAG4	269 aa	Predicted RBP	9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZFPM1	Q8IX07	1006 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TGFBRAP1	Q8WUH2	860 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	OSBP2	Q969R2	916 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	HTATIP2	Q9BUP3	242 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CRNKL1	Q9BZJ0	848 aa	Known RBP	9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZFYVE28	Q9HCC9	887 aa		9.05	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CEP290	O15078	2479 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362		A0A0D9SFI3	127 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	DDTL	A6NHG4	134 aa	Predicted RBP	9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	GPAA1	O43292	621 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PRMT2	P55345	433 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZMYM1	Q5SVZ6	1142 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SH3BP5L	Q7L8J4	393 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	TICAM2	Q86XR7	235 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ANKRD13A	Q8IZ07	590 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SDR42E1	Q8WUS8	393 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SEC62	Q99442	399 aa	Known RBP	9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PTPN18	Q99952	460 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FZD1	Q9UP38	647 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PTCH2	Q9Y6C5	1203 aa		9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	MKI67	P46013	3256 aa	Known RBP	9.04	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PRKAB2	O43741	272 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SDS	P20132	328 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	NMI	Q13287	307 aa	Predicted RBP	9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	DCAF15	Q66K64	600 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CCDC129	Q6ZRS4	1044 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	HOOK2	Q96ED9	719 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	CLMN	Q96JQ2	1002 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	FAM227B	Q96M60	508 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	PRO3102	Q9H379	93 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	DIAPH3	Q9NSV4	1193 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SAP30BP	Q9UHR5	308 aa	Known RBP	9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	SLC4A4	Q9Y6R1	1079 aa		9.03	□□□□□ -0.96
GRAMD1A-208	ENST00000598362	MYH1	P12882	1939 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	HIP1	O00291	1037 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	USP2	O75604	605 aa	Predicted RBP	9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	HLA-DOA	P06340	250 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	CAPN2	P17655	700 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	GTF2A2	P52657	109 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	TAF1C	Q15572	869 aa	Predicted RBP	9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	BMP2KL	Q5H9B9	411 aa		9.02	□□□□□ -0.97
GRAMD1A-208	ENST00000598362	GPR153	Q6NV75	609 aa		9.02	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms