RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 CAP1Q01518 475 aa28.03■■■□□ 2.08
SSBP4-205ENST00000598159 TTF1Q15361 905 aaPredicted RBP28.03■■■□□ 2.08
SSBP4-205ENST00000598159 GPAT2Q6NUI2 795 aa28.03■■■□□ 2.08
SSBP4-205ENST00000598159 ANTXR1Q9H6X2 564 aa28.03■■■□□ 2.08
SSBP4-205ENST00000598159 FAM196BA6NMK8 535 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 GNRH1P01148 92 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 CAP2P40123 477 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 LACTBP83111 547 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-205ENST00000598159 MAPKAPK5Q8IW41 473 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 MAGEB6Q8N7X4 407 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.02■■■□□ 2.08
SSBP4-205ENST00000598159 TBC1D2Q9BYX2 928 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 NDUFB9Q9Y6M9 179 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 DOCK1Q14185 1865 aa28.02■■■□□ 2.08
SSBP4-205ENST00000598159 PARK7Q99497 189 aaKnown RBP28.01■■■□□ 2.07
SSBP4-205ENST00000598159 SLC45A1Q9Y2W3 748 aa28.01■■■□□ 2.07
SSBP4-205ENST00000598159 FLT1P17948 1338 aa28■■■□□ 2.07
SSBP4-205ENST00000598159 DYNLL1P63167 89 aaKnown RBP28■■■□□ 2.07
SSBP4-205ENST00000598159 CPA4Q9UI42 421 aa28■■■□□ 2.07
SSBP4-205ENST00000598159 GADL1Q6ZQY3 521 aa27.99■■■□□ 2.07
SSBP4-205ENST00000598159 METTL16Q86W50 562 aaKnown RBP27.99■■■□□ 2.07
SSBP4-205ENST00000598159 PHIPQ8WWQ0 1821 aa27.99■■■□□ 2.07
SSBP4-205ENST00000598159 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
SSBP4-205ENST00000598159 TRIM75PA6NK02 468 aa27.98■■■□□ 2.07
SSBP4-205ENST00000598159 PALD1Q9ULE6 856 aa27.98■■■□□ 2.07
SSBP4-205ENST00000598159 FOCADQ5VW36 1801 aa27.97■■■□□ 2.07
SSBP4-205ENST00000598159 ADGRA2Q96PE1 1338 aa27.97■■■□□ 2.07
SSBP4-205ENST00000598159 PRMT2P55345 433 aa27.97■■■□□ 2.07
SSBP4-205ENST00000598159 CRACR2BQ8N4Y2 399 aaPredicted RBP27.97■■■□□ 2.07
SSBP4-205ENST00000598159 MIGA1Q8NAN2 632 aa27.97■■■□□ 2.07
SSBP4-205ENST00000598159 TRIM34Q9BYJ4 488 aa27.97■■■□□ 2.07
SSBP4-205ENST00000598159 USP17L5A8MUK1 530 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 HLA-DOAP06340 250 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 USP5P45974 858 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 RRP1BQ14684 758 aaKnown RBP27.96■■■□□ 2.07
SSBP4-205ENST00000598159 NBPF11Q86T75 865 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 ZNF280CQ8ND82 737 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 ARMC5Q96C12 935 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 ARHGAP39Q9C0H5 1083 aa27.96■■■□□ 2.07
SSBP4-205ENST00000598159 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-205ENST00000598159 PTPRFP10586 1907 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 CYP2C8P10632 490 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 HOXD10P28358 340 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 SPP2Q13103 211 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 CCDC84Q86UT8 332 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-205ENST00000598159 PROCA1Q8NCQ7 364 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-205ENST00000598159 BCL11AQ9H165 835 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 AS3MTQ9HBK9 375 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 GINM1Q9NU53 330 aa27.95■■■□□ 2.06
SSBP4-205ENST00000598159 PSMC4P43686 418 aa27.94■■■□□ 2.06
SSBP4-205ENST00000598159 SLC9C2Q5TAH2 1124 aa27.94■■■□□ 2.06
SSBP4-205ENST00000598159 LRRCC1Q9C099 1032 aa27.94■■■□□ 2.06
SSBP4-205ENST00000598159 SAP30BPQ9UHR5 308 aaKnown RBP27.94■■■□□ 2.06
SSBP4-205ENST00000598159 AGTPBP1Q9UPW5 1226 aa27.94■■■□□ 2.06
SSBP4-205ENST00000598159 PTCH2Q9Y6C5 1203 aa27.94■■■□□ 2.06
SSBP4-205ENST00000598159 ASNSP08243 561 aa27.93■■■□□ 2.06
SSBP4-205ENST00000598159 BCRP11274 1271 aa27.93■■■□□ 2.06
SSBP4-205ENST00000598159 ATP5JP18859 108 aa27.93■■■□□ 2.06
SSBP4-205ENST00000598159 DNAJC2Q99543 621 aaKnown RBP27.93■■■□□ 2.06
SSBP4-205ENST00000598159 ATAD5Q96QE3 1844 aa27.92■■■□□ 2.06
SSBP4-205ENST00000598159 GOLIM4O00461 696 aa27.92■■■□□ 2.06
SSBP4-205ENST00000598159 SLC9C1Q4G0N8 1177 aa27.92■■■□□ 2.06
SSBP4-205ENST00000598159 WDR18Q9BV38 432 aa27.92■■■□□ 2.06
SSBP4-205ENST00000598159 DNAJC18Q9H819 358 aa27.92■■■□□ 2.06
SSBP4-205ENST00000598159 MYH1P12882 1939 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 SIPA1L1O43166 1804 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 MAGEB6P1A0A0J9YX57 407 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 FMNL1O95466 1100 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-205ENST00000598159 SH3D19Q5HYK7 790 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 TTC6Q86TZ1 520 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 RIOK1Q9BRS2 568 aaKnown RBP27.91■■■□□ 2.06
SSBP4-205ENST00000598159 BOLA2Q9H3K6 86 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 PNMA3Q9UL41 463 aa27.91■■■□□ 2.06
SSBP4-205ENST00000598159 PDE6AP16499 860 aa27.9■■■□□ 2.06
SSBP4-205ENST00000598159 TRIM47Q96LD4 638 aa27.9■■■□□ 2.06
SSBP4-205ENST00000598159 SRRDQ9UH36 339 aa27.9■■■□□ 2.06
SSBP4-205ENST00000598159 CTGFP29279 349 aa27.89■■■□□ 2.06
SSBP4-205ENST00000598159 PABPC4Q13310 644 aaKnown RBP eCLIP27.89■■■□□ 2.06
SSBP4-205ENST00000598159 SMCR8Q8TEV9 937 aaPredicted RBP27.89■■■□□ 2.06
SSBP4-205ENST00000598159 ZNF333Q96JL9 665 aa27.89■■■□□ 2.06
SSBP4-205ENST00000598159 PAG1Q9NWQ8 432 aa27.89■■■□□ 2.06
SSBP4-205ENST00000598159 HMGCS2P54868 508 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 FCGRTP55899 365 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 TREML2Q5T2D2 321 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 HAUS7Q99871 368 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 TMEM106CQ9BVX2 250 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 EHD4Q9H223 541 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 DCTPP1Q9H773 170 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 SERPINB13Q9UIV8 391 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 ZNF532Q9HCE3 1301 aa27.88■■■□□ 2.05
SSBP4-205ENST00000598159 C19orf81C9J6K1 198 aa27.87■■■□□ 2.05
SSBP4-205ENST00000598159 ECM2O94769 699 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-205ENST00000598159 OSBPP22059 807 aa27.87■■■□□ 2.05
SSBP4-205ENST00000598159 BACE1P56817 501 aa27.87■■■□□ 2.05
SSBP4-205ENST00000598159 TATDN1Q6P1N9 297 aa27.87■■■□□ 2.05
SSBP4-205ENST00000598159 CRNKL1Q9BZJ0 848 aaKnown RBP27.87■■■□□ 2.05
SSBP4-205ENST00000598159 ZSWIM8A7E2V4 1837 aa27.87■■■□□ 2.05
SSBP4-205ENST00000598159 HTTP42858 3142 aa27.86■■■□□ 2.05
SSBP4-205ENST00000598159 TCRBV5S4A2TA0A5A2 114 aa27.86■■■□□ 2.05
SSBP4-205ENST00000598159 JAG1P78504 1218 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms