RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 BAZ2AQ9UIF9 1905 aaKnown RBP24.37■■□□□ 1.49
PNKP-211ENST00000598020 POLR3DP05423 398 aaPredicted RBP24.36■■□□□ 1.49
PNKP-211ENST00000598020 VEGFBP49765 207 aa24.36■■□□□ 1.49
PNKP-211ENST00000598020 CAPNS2Q96L46 248 aa24.36■■□□□ 1.49
PNKP-211ENST00000598020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.36■■□□□ 1.49
PNKP-211ENST00000598020 FAM155AB1AL88 458 aaPredicted RBP24.35■■□□□ 1.49
PNKP-211ENST00000598020 SLC10A3P09131 477 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 PLCD1P51178 756 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 SBK1Q52WX2 424 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 NOL9Q5SY16 702 aaKnown RBP24.35■■□□□ 1.49
PNKP-211ENST00000598020 CYP4F22Q6NT55 531 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 SLC10A4Q96EP9 437 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 CLMNQ96JQ2 1002 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 SERPINB13Q9UIV8 391 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 CSADQ9Y600 493 aa24.35■■□□□ 1.49
PNKP-211ENST00000598020 WDR33Q9C0J8 1336 aaKnown RBP24.35■■□□□ 1.49
PNKP-211ENST00000598020 SLURP2P0DP57 97 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 MFAP1P55081 439 aaKnown RBP24.34■■□□□ 1.49
PNKP-211ENST00000598020 VGLL4Q14135 290 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 C12orf60Q5U649 245 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 CWC27Q6UX04 472 aaKnown RBP24.34■■□□□ 1.49
PNKP-211ENST00000598020 CCDC129Q6ZRS4 1044 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 RASAL3Q86YV0 1011 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 NACAP1Q9BZK3 213 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 DNAJC18Q9H819 358 aa24.34■■□□□ 1.49
PNKP-211ENST00000598020 EPB41L4AQ9HCS5 686 aaPredicted RBP24.34■■□□□ 1.49
PNKP-211ENST00000598020 ARPP21Q9UBL0 812 aaPredicted RBP24.34■■□□□ 1.49
PNKP-211ENST00000598020 USP17L12C9JPN9 530 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 USP17L21D6R901 530 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 FOXP2O15409 715 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 CTNND1O60716 968 aaKnown RBP24.33■■□□□ 1.49
PNKP-211ENST00000598020 CHMLP26374 656 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 INPP5BP32019 993 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 GABPAQ06546 454 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 CTR9Q6PD62 1173 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 PAXIP1Q6ZW49 1069 aaPredicted RBP24.33■■□□□ 1.49
PNKP-211ENST00000598020 ZNF589Q86UQ0 364 aaPredicted RBP24.33■■□□□ 1.49
PNKP-211ENST00000598020 AMOTL1Q8IY63 956 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 IFNL3Q8IZI9 196 aa24.33■■□□□ 1.49
PNKP-211ENST00000598020 CRACR2BQ8N4Y2 399 aaPredicted RBP24.33■■□□□ 1.49
PNKP-211ENST00000598020 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.48
PNKP-211ENST00000598020 ALX1Q15699 326 aa24.32■■□□□ 1.48
PNKP-211ENST00000598020 ZKSCAN4Q969J2 545 aaPredicted RBP24.32■■□□□ 1.48
PNKP-211ENST00000598020 SNCAIPQ9Y6H5 919 aa24.32■■□□□ 1.48
PNKP-211ENST00000598020 RAD50Q92878 1312 aa24.32■■□□□ 1.48
PNKP-211ENST00000598020 FAM196BA6NMK8 535 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 APPP05067 770 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 MAP2K2P36507 400 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 NOGQ13253 232 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 TATDN1Q6P1N9 297 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 TRIM34Q9BYJ4 488 aa24.31■■□□□ 1.48
PNKP-211ENST00000598020 ZBTB48P10074 688 aaPredicted RBP24.3■■□□□ 1.48
PNKP-211ENST00000598020 CYP2D6P10635 497 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 SLC4A8Q2Y0W8 1093 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 SPRYD7Q5W111 196 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 SCYL3Q8IZE3 742 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 RUFY2Q8WXA3 655 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 WNK4Q96J92 1243 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 ELP3Q9H9T3 547 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 GINM1Q9NU53 330 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 THSD7BQ9C0I4 1608 aa24.3■■□□□ 1.48
PNKP-211ENST00000598020 SPDYE5A6NIY4 337 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 HSPD1P10809 573 aaKnown RBP24.29■■□□□ 1.48
PNKP-211ENST00000598020 CAP2P40123 477 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 TDO2P48775 406 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 VPS53Q5VIR6 699 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 ERO1BQ86YB8 467 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 JMYQ8N9B5 988 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 SWAP70Q9UH65 585 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 ZMYM6O95789 1325 aa24.29■■□□□ 1.48
PNKP-211ENST00000598020 EVX2Q03828 476 aa24.28■■□□□ 1.48
PNKP-211ENST00000598020 RRP1BQ14684 758 aaKnown RBP24.28■■□□□ 1.48
PNKP-211ENST00000598020 NAPBQ9H115 298 aa24.28■■□□□ 1.48
PNKP-211ENST00000598020 DOCK1Q14185 1865 aa24.28■■□□□ 1.48
PNKP-211ENST00000598020 ROBO3Q96MS0 1386 aa24.28■■□□□ 1.48
PNKP-211ENST00000598020 LAMB1P07942 1786 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 CYP2D7A0A087X1C5 515 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 SHMT1P34896 483 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 PPATQ06203 517 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 C16orf86Q6ZW13 317 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 OPTNQ96CV9 577 aa24.27■■□□□ 1.48
PNKP-211ENST00000598020 GJA5P36382 358 aa24.26■■□□□ 1.47
PNKP-211ENST00000598020 GRM1Q13255 1194 aa24.26■■□□□ 1.47
PNKP-211ENST00000598020 REM2Q8IYK8 340 aaPredicted RBP24.26■■□□□ 1.47
PNKP-211ENST00000598020 IL25Q9H293 177 aa24.26■■□□□ 1.47
PNKP-211ENST00000598020 PICK1Q9NRD5 415 aa24.26■■□□□ 1.47
PNKP-211ENST00000598020 SMIM22K7EJ46 135 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 SGSM2O43147 1006 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 AOC2O75106 756 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 FGAP02671 866 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 PTPRAP18433 802 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 PPIL2Q13356 520 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 DYNLL2Q96FJ2 89 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 DSCC1Q9BVC3 393 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 ATAD5Q96QE3 1844 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
PNKP-211ENST00000598020 MINDY4BA8MYZ0 360 aa24.24■■□□□ 1.47
PNKP-211ENST00000598020 ASNSP08243 561 aa24.24■■□□□ 1.47
PNKP-211ENST00000598020 CDK8P49336 464 aa24.24■■□□□ 1.47
PNKP-211ENST00000598020 KIF23Q02241 960 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms