RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 VEZTQ9HBM0 779 aa13.54□□□□□ -0.24
SH2D3A-205ENST00000597168 TOMM22Q9NS69 142 aa13.54□□□□□ -0.24
SH2D3A-205ENST00000597168 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
SH2D3A-205ENST00000597168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
SH2D3A-205ENST00000597168 NEDD4P46934 1319 aa13.54□□□□□ -0.24
SH2D3A-205ENST00000597168 DDTLA6NHG4 134 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 ORC4O43929 436 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 MCM2P49736 904 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 AK2P54819 239 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 PDE4BQ07343 736 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 BECN1Q14457 450 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 Q6ZUG5 572 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 DDX60LQ5H9U9 1706 aaKnown RBP13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 LAMB1P07942 1786 aa13.53□□□□□ -0.24
SH2D3A-205ENST00000597168 PRC1O43663 620 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 KDM4AO75164 1064 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 PRDM1O75626 825 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 CDK8P49336 464 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ANTXR2P58335 489 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 GABPAQ06546 454 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 FAM83AQ86UY5 434 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 HSCBQ8IWL3 235 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ESR2Q92731 530 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ADARB2Q9NS39 739 aaKnown RBP13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 CNTNAP1P78357 1384 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.25
SH2D3A-205ENST00000597168 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 TNNI2P48788 182 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 TOB2Q14106 344 aaPredicted RBP13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 SLC44A5Q8NCS7 719 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 EHD4Q9H223 541 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 ZNF287Q9HBT7 754 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
SH2D3A-205ENST00000597168 ATRNL1Q5VV63 1379 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 NT5C2P49902 561 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 FGD1P98174 961 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 RASA3Q14644 834 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 FAM47AQ5JRC9 791 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 NOL8Q76FK4 1167 aaKnown RBP13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 IGDCC4Q8TDY8 1250 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 TMEM87BQ96K49 555 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 LIMCH1Q9UPQ0 1083 aa13.5□□□□□ -0.25
SH2D3A-205ENST00000597168 COL2A1P02458 1487 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 RASA1P20936 1047 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 TFAP4Q01664 338 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 ANGEL2Q5VTE6 544 aaKnown RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
SH2D3A-205ENST00000597168 TSPY2A6NKD2 308 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 POTECB2RU33 542 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 SHMT1P34896 483 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 EPHX2P34913 555 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 USP50Q70EL3 339 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 BRF1Q92994 677 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 CSRNP1Q96S65 589 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
SH2D3A-205ENST00000597168 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
SH2D3A-205ENST00000597168 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms