RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 FOXN1O15353 648 aa18.06■□□□□ 0.48
SCN1B-204ENST00000596348 ZBTB48P10074 688 aaPredicted RBP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 EVX2Q03828 476 aa18.06■□□□□ 0.48
SCN1B-204ENST00000596348 RRP1BQ14684 758 aaKnown RBP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 NOL9Q5SY16 702 aaKnown RBP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
SCN1B-204ENST00000596348 EVI5LQ96CN4 794 aa18.06■□□□□ 0.48
SCN1B-204ENST00000596348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 DCP1AQ9NPI6 582 aaPredicted RBP18.06■□□□□ 0.48
SCN1B-204ENST00000596348 PI4KBQ9UBF8 816 aa18.06■□□□□ 0.48
SCN1B-204ENST00000596348 M0R2C6 588 aa18.05■□□□□ 0.48
SCN1B-204ENST00000596348 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
SCN1B-204ENST00000596348 STRBPQ96SI9 672 aaKnown RBP18.05■□□□□ 0.48
SCN1B-204ENST00000596348 SEC62Q99442 399 aaKnown RBP18.05■□□□□ 0.48
SCN1B-204ENST00000596348 HERC5Q9UII4 1024 aaKnown RBP18.05■□□□□ 0.48
SCN1B-204ENST00000596348 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
SCN1B-204ENST00000596348 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
SCN1B-204ENST00000596348 ERO1BQ86YB8 467 aa18.04■□□□□ 0.48
SCN1B-204ENST00000596348 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.04■□□□□ 0.48
SCN1B-204ENST00000596348 PHIPQ8WWQ0 1821 aa18.04■□□□□ 0.48
SCN1B-204ENST00000596348 GPAA1O43292 621 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 HLA-DOAP06340 250 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 CYP2D6P10635 497 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 TM4SF4P48230 202 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 PLCD1P51178 756 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 LRRFIP1Q32MZ4 808 aaKnown RBP18.03■□□□□ 0.48
SCN1B-204ENST00000596348 FOXP4Q8IVH2 680 aaPredicted RBP18.03■□□□□ 0.48
SCN1B-204ENST00000596348 SCYL3Q8IZE3 742 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 MS4A4AQ96JQ5 239 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 MCM9Q9NXL9 1143 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
SCN1B-204ENST00000596348 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 IRF6O14896 467 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 CTNND1O60716 968 aaKnown RBP18.02■□□□□ 0.48
SCN1B-204ENST00000596348 JAG1P78504 1218 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 PPIL2Q13356 520 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 SHROOM1Q2M3G4 852 aaPredicted RBP18.02■□□□□ 0.48
SCN1B-204ENST00000596348 CRACR2BQ8N4Y2 399 aaPredicted RBP18.02■□□□□ 0.48
SCN1B-204ENST00000596348 EHD4Q9H223 541 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 TSKSQ9UJT2 592 aa18.02■□□□□ 0.48
SCN1B-204ENST00000596348 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
SCN1B-204ENST00000596348 GSG1L2A8MUP6 293 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 SMIM22K7EJ46 135 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 NEFLP07196 543 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 PTPRAP18433 802 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 CAP2P40123 477 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 PPATQ06203 517 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 SREBF2Q12772 1141 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
SCN1B-204ENST00000596348 TTC6Q86TZ1 520 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 CCDC84Q86UT8 332 aaPredicted RBP18.01■□□□□ 0.47
SCN1B-204ENST00000596348 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
SCN1B-204ENST00000596348 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 BEGAINQ9BUH8 593 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 RNF186Q9NXI6 227 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 SERPINB13Q9UIV8 391 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 PTPRFP10586 1907 aa18.01■□□□□ 0.47
SCN1B-204ENST00000596348 IGF2BP3O00425 579 aaKnown RBP eCLIP18■□□□□ 0.47
SCN1B-204ENST00000596348 POLR3DP05423 398 aaPredicted RBP18■□□□□ 0.47
SCN1B-204ENST00000596348 HSPA8P11142 646 aaKnown RBP18■□□□□ 0.47
SCN1B-204ENST00000596348 GSPT1P15170 499 aaKnown RBP18■□□□□ 0.47
SCN1B-204ENST00000596348 GABPAQ06546 454 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 SKAP1Q86WV1 359 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 BRI3BPQ8WY22 251 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 FAM227BQ96M60 508 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 PTPN18Q99952 460 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 EPB41L4AQ9HCS5 686 aaPredicted RBP18■□□□□ 0.47
SCN1B-204ENST00000596348 PICK1Q9NRD5 415 aa18■□□□□ 0.47
SCN1B-204ENST00000596348 A0A0D9SFI3 127 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
SCN1B-204ENST00000596348 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 USP17L21D6R901 530 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 TRPA1O75762 1119 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
SCN1B-204ENST00000596348 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 TRIM34Q9BYJ4 488 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
SCN1B-204ENST00000596348 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 FOXP2O15409 715 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 CA12O43570 354 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 GDF11O95390 407 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 SHMT1P34896 483 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 GTF2A2P52657 109 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
SCN1B-204ENST00000596348 CCL15Q16663 113 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 C12orf60Q5U649 245 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 CTR9Q6PD62 1173 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 IFNL1Q8IU54 200 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 SLC44A5Q8NCS7 719 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 DYNLL2Q96FJ2 89 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 ZHX2Q9Y6X8 837 aa17.98■□□□□ 0.47
SCN1B-204ENST00000596348 SDSP20132 328 aa17.97■□□□□ 0.47
SCN1B-204ENST00000596348 LBX1P52954 281 aa17.97■□□□□ 0.47
SCN1B-204ENST00000596348 INHBEP58166 350 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms