RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 RILPL2Q969X0 211 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 AIDAQ96BJ3 306 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 CSADQ9Y600 493 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 ZFYP08048 801 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 CYP2D6P10635 497 aa16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 DCP1AQ9NPI6 582 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 PI4KBQ9UBF8 816 aa16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
SHKBP1-207ENST00000595631 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 SMIM22K7EJ46 135 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 GPAA1O43292 621 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 PLCD1P51178 756 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
SHKBP1-207ENST00000595631 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 TBC1D12O60347 775 aa16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 GSPT1P15170 499 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 CCDC84Q86UT8 332 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 WBP1LQ9NX94 342 aa16.58■□□□□ 0.24
SHKBP1-207ENST00000595631 A0A0D9SFI3 127 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 TSKSQ9UJT2 592 aa16.57■□□□□ 0.24
SHKBP1-207ENST00000595631 GSG1L2A8MUP6 293 aa16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 FOXN1O15353 648 aa16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 JAG1P78504 1218 aa16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 METTL16Q86W50 562 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 FOXP4Q8IVH2 680 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 ATP8A2Q9NTI2 1148 aa16.56■□□□□ 0.24
SHKBP1-207ENST00000595631 PCNTO95613 3336 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 USP17L21D6R901 530 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 GDF11O95390 407 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 TTC6Q86TZ1 520 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 SERPINB13Q9UIV8 391 aa16.55■□□□□ 0.24
SHKBP1-207ENST00000595631 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 IRF6O14896 467 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 SDSP20132 328 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 CAP2P40123 477 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 PPIL2Q13356 520 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 SLC44A5Q8NCS7 719 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 EHD4Q9H223 541 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
SHKBP1-207ENST00000595631 MANSC4A6NHS7 340 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 FOXP2O15409 715 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 APPP05067 770 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 PTPRAP18433 802 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 SHMT1P34896 483 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 TM4SF4P48230 202 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 GABPAQ06546 454 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 HELLSQ9NRZ9 838 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 RNF186Q9NXI6 227 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
SHKBP1-207ENST00000595631 CCL15-CCL14A0A0B4J2E2 113 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 TRPA1O75762 1119 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 PPATQ06203 517 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 CCL15Q16663 113 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 PTPN18Q99952 460 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.24
SHKBP1-207ENST00000595631 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms