RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 DIAPH3Q9NSV4 1193 aa27.47■■□□□ 1.99
PNKP-205ENST00000595081 ZNF112Q9UJU3 913 aa27.47■■□□□ 1.99
PNKP-205ENST00000595081 PHF20L1A8MW92 1017 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 FAM155AB1AL88 458 aaPredicted RBP27.46■■□□□ 1.99
PNKP-205ENST00000595081 TBC1D12O60347 775 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 POLR3DP05423 398 aaPredicted RBP27.46■■□□□ 1.99
PNKP-205ENST00000595081 ECE1P42892 770 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 PLCD1P51178 756 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 SLC10A4Q96EP9 437 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 ELP3Q9H9T3 547 aa27.46■■□□□ 1.99
PNKP-205ENST00000595081 AOC2O75106 756 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 SLC10A3P09131 477 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 GNAT2P19087 354 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 MCMDC2Q4G0Z9 681 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 CRACR2BQ8N4Y2 399 aaPredicted RBP27.45■■□□□ 1.98
PNKP-205ENST00000595081 CCDC102AQ96A19 550 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 DDRGK1Q96HY6 314 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 DNAJC18Q9H819 358 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 EPB41L4AQ9HCS5 686 aaPredicted RBP27.45■■□□□ 1.98
PNKP-205ENST00000595081 HERC5Q9UII4 1024 aaKnown RBP27.45■■□□□ 1.98
PNKP-205ENST00000595081 CSADQ9Y600 493 aa27.45■■□□□ 1.98
PNKP-205ENST00000595081 CYP2D7A0A087X1C5 515 aa27.44■■□□□ 1.98
PNKP-205ENST00000595081 UNCXA6NJT0 531 aa27.44■■□□□ 1.98
PNKP-205ENST00000595081 CWC27Q6UX04 472 aaKnown RBP27.44■■□□□ 1.98
PNKP-205ENST00000595081 TTC6Q86TZ1 520 aa27.44■■□□□ 1.98
PNKP-205ENST00000595081 ZNF589Q86UQ0 364 aaPredicted RBP27.44■■□□□ 1.98
PNKP-205ENST00000595081 FOXP4Q8IVH2 680 aaPredicted RBP27.44■■□□□ 1.98
PNKP-205ENST00000595081 SNCAIPQ9Y6H5 919 aa27.44■■□□□ 1.98
PNKP-205ENST00000595081 BAZ2AQ9UIF9 1905 aaKnown RBP27.43■■□□□ 1.98
PNKP-205ENST00000595081 USP17L12C9JPN9 530 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 USP17L21D6R901 530 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 HIP1O00291 1037 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 APPP05067 770 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 MKRN3Q13064 507 aaKnown RBP27.43■■□□□ 1.98
PNKP-205ENST00000595081 METTL16Q86W50 562 aaKnown RBP27.43■■□□□ 1.98
PNKP-205ENST00000595081 CNKSR2Q8WXI2 1034 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 TRIM34Q9BYJ4 488 aa27.43■■□□□ 1.98
PNKP-205ENST00000595081 PATL2C9JE40 543 aaKnown RBP27.42■■□□□ 1.98
PNKP-205ENST00000595081 SMIM22K7EJ46 135 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 FOXP2O15409 715 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 RRP1BQ14684 758 aaKnown RBP27.42■■□□□ 1.98
PNKP-205ENST00000595081 VPS53Q5VIR6 699 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 ZIC5Q96T25 663 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 EHD4Q9H223 541 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 SERPINB13Q9UIV8 391 aa27.42■■□□□ 1.98
PNKP-205ENST00000595081 GIMAP6Q6P9H5 292 aa27.41■■□□□ 1.98
PNKP-205ENST00000595081 CTR9Q6PD62 1173 aa27.41■■□□□ 1.98
PNKP-205ENST00000595081 CCDC171Q6TFL3 1326 aa27.41■■□□□ 1.98
PNKP-205ENST00000595081 GJA5P36382 358 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 TDO2P48775 406 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 BMP2KLQ5H9B9 411 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 C12orf60Q5U649 245 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 SPRYD7Q5W111 196 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 IFNL3Q8IZI9 196 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 WNK4Q96J92 1243 aa27.4■■□□□ 1.98
PNKP-205ENST00000595081 CHMLP26374 656 aa27.39■■□□□ 1.98
PNKP-205ENST00000595081 NOGQ13253 232 aa27.39■■□□□ 1.98
PNKP-205ENST00000595081 NOL9Q5SY16 702 aaKnown RBP27.39■■□□□ 1.98
PNKP-205ENST00000595081 AMOTL1Q8IY63 956 aa27.39■■□□□ 1.98
PNKP-205ENST00000595081 OPTNQ96CV9 577 aa27.39■■□□□ 1.98
PNKP-205ENST00000595081 DYNLL2Q96FJ2 89 aa27.39■■□□□ 1.98
PNKP-205ENST00000595081 ARPP21Q9UBL0 812 aaPredicted RBP27.39■■□□□ 1.98
PNKP-205ENST00000595081 PCNTO95613 3336 aa27.39■■□□□ 1.97
PNKP-205ENST00000595081 CTNND1O60716 968 aaKnown RBP27.38■■□□□ 1.97
PNKP-205ENST00000595081 GABPAQ06546 454 aa27.38■■□□□ 1.97
PNKP-205ENST00000595081 SCYL3Q8IZE3 742 aa27.38■■□□□ 1.97
PNKP-205ENST00000595081 SLC44A5Q8NCS7 719 aa27.38■■□□□ 1.97
PNKP-205ENST00000595081 NACAP1Q9BZK3 213 aa27.38■■□□□ 1.97
PNKP-205ENST00000595081 IL25Q9H293 177 aa27.38■■□□□ 1.97
PNKP-205ENST00000595081 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.38■■□□□ 1.97
PNKP-205ENST00000595081 SPDYE5A6NIY4 337 aa27.37■■□□□ 1.97
PNKP-205ENST00000595081 KIF23Q02241 960 aaPredicted RBP27.37■■□□□ 1.97
PNKP-205ENST00000595081 SHROOM1Q2M3G4 852 aaPredicted RBP27.37■■□□□ 1.97
PNKP-205ENST00000595081 OTUD5Q96G74 571 aa27.37■■□□□ 1.97
PNKP-205ENST00000595081 THSD7BQ9C0I4 1608 aa27.37■■□□□ 1.97
PNKP-205ENST00000595081 MINDY4BA8MYZ0 360 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 SHMT1P34896 483 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 CAP2P40123 477 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 SBK1Q52WX2 424 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 ERO1BQ86YB8 467 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 NAPBQ9H115 298 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 PICK1Q9NRD5 415 aa27.36■■□□□ 1.97
PNKP-205ENST00000595081 GDF11O95390 407 aa27.35■■□□□ 1.97
PNKP-205ENST00000595081 HSPD1P10809 573 aaKnown RBP27.35■■□□□ 1.97
PNKP-205ENST00000595081 MAP2K2P36507 400 aa27.35■■□□□ 1.97
PNKP-205ENST00000595081 MFAP1P55081 439 aaKnown RBP27.35■■□□□ 1.97
PNKP-205ENST00000595081 JAG1P78504 1218 aa27.35■■□□□ 1.97
PNKP-205ENST00000595081 TATDN1Q6P1N9 297 aa27.35■■□□□ 1.97
PNKP-205ENST00000595081 CCDC84Q86UT8 332 aaPredicted RBP27.35■■□□□ 1.97
PNKP-205ENST00000595081 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
PNKP-205ENST00000595081 ZBTB48P10074 688 aaPredicted RBP27.34■■□□□ 1.97
PNKP-205ENST00000595081 STK11IPQ8N1F8 1099 aa27.34■■□□□ 1.97
PNKP-205ENST00000595081 DOCK1Q14185 1865 aa27.34■■□□□ 1.97
PNKP-205ENST00000595081 PTPRAP18433 802 aa27.33■■□□□ 1.97
PNKP-205ENST00000595081 C16orf86Q6ZW13 317 aa27.32■■□□□ 1.96
PNKP-205ENST00000595081 RUFY2Q8WXA3 655 aa27.32■■□□□ 1.96
PNKP-205ENST00000595081 SWAP70Q9UH65 585 aa27.32■■□□□ 1.96
PNKP-205ENST00000595081 ZHX2Q9Y6X8 837 aa27.32■■□□□ 1.96
PNKP-205ENST00000595081 IRF6O14896 467 aa27.31■■□□□ 1.96
PNKP-205ENST00000595081 FGAP02671 866 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms