RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HERC5Q9UII4 1024 aaKnown RBP28.62■■■□□ 2.17
LSM4-204ENST00000594828 MYO5AQ9Y4I1 1855 aaKnown RBP28.61■■■□□ 2.17
LSM4-204ENST00000594828 RAB11FIP3O75154 756 aa28.61■■■□□ 2.17
LSM4-204ENST00000594828 MAP3K12Q12852 859 aa28.61■■■□□ 2.17
LSM4-204ENST00000594828 MAGEB6Q8N7X4 407 aa28.61■■■□□ 2.17
LSM4-204ENST00000594828 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.61■■■□□ 2.17
LSM4-204ENST00000594828 DOCK1Q14185 1865 aa28.6■■■□□ 2.17
LSM4-204ENST00000594828 TRIM75PA6NK02 468 aa28.6■■■□□ 2.17
LSM4-204ENST00000594828 IFIT2P09913 472 aaKnown RBP28.6■■■□□ 2.17
LSM4-204ENST00000594828 DYNLL1P63167 89 aaKnown RBP28.6■■■□□ 2.17
LSM4-204ENST00000594828 GADL1Q6ZQY3 521 aa28.6■■■□□ 2.17
LSM4-204ENST00000594828 PARK7Q99497 189 aaKnown RBP28.6■■■□□ 2.17
LSM4-204ENST00000594828 ARHGAP39Q9C0H5 1083 aa28.6■■■□□ 2.17
LSM4-204ENST00000594828 FLT1P17948 1338 aa28.6■■■□□ 2.17
LSM4-204ENST00000594828 CAP2P40123 477 aa28.59■■■□□ 2.17
LSM4-204ENST00000594828 CCDC84Q86UT8 332 aaPredicted RBP28.59■■■□□ 2.17
LSM4-204ENST00000594828 BCL11AQ9H165 835 aa28.59■■■□□ 2.17
LSM4-204ENST00000594828 GNRH1P01148 92 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 CYP2C8P10632 490 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 TMED8Q6PL24 325 aaPredicted RBP28.58■■■□□ 2.17
LSM4-204ENST00000594828 CERS3Q8IU89 383 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 FOXP4Q8IVH2 680 aaPredicted RBP28.58■■■□□ 2.17
LSM4-204ENST00000594828 MIGA1Q8NAN2 632 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 PALD1Q9ULE6 856 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 ADGRA2Q96PE1 1338 aa28.58■■■□□ 2.17
LSM4-204ENST00000594828 RRP1BQ14684 758 aaKnown RBP28.57■■■□□ 2.16
LSM4-204ENST00000594828 TTF1Q15361 905 aaPredicted RBP28.57■■■□□ 2.16
LSM4-204ENST00000594828 ARMC5Q96C12 935 aa28.57■■■□□ 2.16
LSM4-204ENST00000594828 SLC45A1Q9Y2W3 748 aa28.57■■■□□ 2.16
LSM4-204ENST00000594828 PTCH2Q9Y6C5 1203 aa28.57■■■□□ 2.16
LSM4-204ENST00000594828 ECM2O94769 699 aaPredicted RBP28.56■■■□□ 2.16
LSM4-204ENST00000594828 TBC1D2Q9BYX2 928 aa28.56■■■□□ 2.16
LSM4-204ENST00000594828 SPP2Q13103 211 aa28.55■■■□□ 2.16
LSM4-204ENST00000594828 CRACR2BQ8N4Y2 399 aaPredicted RBP28.55■■■□□ 2.16
LSM4-204ENST00000594828 ZNF280CQ8ND82 737 aa28.55■■■□□ 2.16
LSM4-204ENST00000594828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.55■■■□□ 2.16
LSM4-204ENST00000594828 TRIM34Q9BYJ4 488 aa28.55■■■□□ 2.16
LSM4-204ENST00000594828 SAP30BPQ9UHR5 308 aaKnown RBP28.55■■■□□ 2.16
LSM4-204ENST00000594828 USP17L5A8MUK1 530 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 PSMC4P43686 418 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 USP5P45974 858 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 SLC9C1Q4G0N8 1177 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 NBPF11Q86T75 865 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 METTL16Q86W50 562 aaKnown RBP28.54■■■□□ 2.16
LSM4-204ENST00000594828 PHIPQ8WWQ0 1821 aa28.54■■■□□ 2.16
LSM4-204ENST00000594828 HLA-DOAP06340 250 aa28.53■■■□□ 2.16
LSM4-204ENST00000594828 BCRP11274 1271 aa28.53■■■□□ 2.16
LSM4-204ENST00000594828 PRMT2P55345 433 aa28.53■■■□□ 2.16
LSM4-204ENST00000594828 AGTPBP1Q9UPW5 1226 aa28.53■■■□□ 2.16
LSM4-204ENST00000594828 CDK5RAP2Q96SN8 1893 aa28.53■■■□□ 2.16
LSM4-204ENST00000594828 FMNL1O95466 1100 aaPredicted RBP28.52■■■□□ 2.16
LSM4-204ENST00000594828 CTGFP29279 349 aa28.52■■■□□ 2.16
LSM4-204ENST00000594828 TRIM47Q96LD4 638 aa28.52■■■□□ 2.16
LSM4-204ENST00000594828 DNAJC2Q99543 621 aaKnown RBP28.52■■■□□ 2.16
LSM4-204ENST00000594828 DNAJC18Q9H819 358 aa28.52■■■□□ 2.16
LSM4-204ENST00000594828 AS3MTQ9HBK9 375 aa28.52■■■□□ 2.16
LSM4-204ENST00000594828 FOCADQ5VW36 1801 aa28.51■■■□□ 2.15
LSM4-204ENST00000594828 GOLIM4O00461 696 aa28.51■■■□□ 2.15
LSM4-204ENST00000594828 HOXD10P28358 340 aa28.51■■■□□ 2.15
LSM4-204ENST00000594828 SLC9C2Q5TAH2 1124 aa28.51■■■□□ 2.15
LSM4-204ENST00000594828 PROCA1Q8NCQ7 364 aaPredicted RBP28.51■■■□□ 2.15
LSM4-204ENST00000594828 ZSWIM8A7E2V4 1837 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 PTPRFP10586 1907 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 POTEFA5A3E0 1075 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 ASNSP08243 561 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 SLC4A8Q2Y0W8 1093 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 TREML2Q5T2D2 321 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 SMCR8Q8TEV9 937 aaPredicted RBP28.5■■■□□ 2.15
LSM4-204ENST00000594828 ZNF333Q96JL9 665 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 SRRDQ9UH36 339 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 SIPA1L1O43166 1804 aa28.5■■■□□ 2.15
LSM4-204ENST00000594828 RIOK1Q9BRS2 568 aaKnown RBP28.49■■■□□ 2.15
LSM4-204ENST00000594828 MAGEB6P1A0A0J9YX57 407 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 PDE6AP16499 860 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 OSBPP22059 807 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 HMGCS2P54868 508 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 WDR18Q9BV38 432 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 TMEM106CQ9BVX2 250 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 LRRCC1Q9C099 1032 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 BOLA2Q9H3K6 86 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 GINM1Q9NU53 330 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 PNMA3Q9UL41 463 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 ATAD5Q96QE3 1844 aa28.48■■■□□ 2.15
LSM4-204ENST00000594828 HTTP42858 3142 aa28.47■■■□□ 2.15
LSM4-204ENST00000594828 ATP5JP18859 108 aa28.47■■■□□ 2.15
LSM4-204ENST00000594828 FCGRTP55899 365 aa28.47■■■□□ 2.15
LSM4-204ENST00000594828 JAG1P78504 1218 aa28.47■■■□□ 2.15
LSM4-204ENST00000594828 SH3D19Q5HYK7 790 aa28.47■■■□□ 2.15
LSM4-204ENST00000594828 ZNF532Q9HCE3 1301 aa28.46■■■□□ 2.15
LSM4-204ENST00000594828 GDF11O95390 407 aa28.46■■■□□ 2.15
LSM4-204ENST00000594828 PABPC4Q13310 644 aaKnown RBP eCLIP28.46■■■□□ 2.15
LSM4-204ENST00000594828 TTC6Q86TZ1 520 aa28.46■■■□□ 2.15
LSM4-204ENST00000594828 SH3TC2Q8TF17 1288 aa28.46■■■□□ 2.15
LSM4-204ENST00000594828 EDC3Q96F86 508 aaKnown RBP28.46■■■□□ 2.15
LSM4-204ENST00000594828 PAG1Q9NWQ8 432 aa28.46■■■□□ 2.15
LSM4-204ENST00000594828 RAET1EQ8TD07 263 aa28.45■■■□□ 2.14
LSM4-204ENST00000594828 SERPINB13Q9UIV8 391 aa28.45■■■□□ 2.14
LSM4-204ENST00000594828 BACE1P56817 501 aa28.44■■■□□ 2.14
LSM4-204ENST00000594828 MTMR2Q13614 643 aa28.44■■■□□ 2.14
LSM4-204ENST00000594828 CRNKL1Q9BZJ0 848 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms