RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 HTRA3P83110 453 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
XRCC1-204ENST00000594511 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
XRCC1-204ENST00000594511 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
XRCC1-204ENST00000594511 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
XRCC1-204ENST00000594511 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 USP17L21D6R901 530 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 HLA-DOAP06340 250 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SLC10A3P09131 477 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SLURP2P0DP57 97 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
XRCC1-204ENST00000594511 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
XRCC1-204ENST00000594511 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 IL25Q9H293 177 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 ARPP21Q9UBL0 812 aaPredicted RBP13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SAP30BPQ9UHR5 308 aaKnown RBP13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SERPINB13Q9UIV8 391 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 ABT1Q9ULW3 272 aaKnown RBP13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
XRCC1-204ENST00000594511 SGSM2O43147 1006 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
XRCC1-204ENST00000594511 INPP5BP32019 993 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 CAP2P40123 477 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 ECE1P42892 770 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 VEGFBP49765 207 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 VGLL4Q14135 290 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 JMYQ8N9B5 988 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.42□□□□□ -0.26
XRCC1-204ENST00000594511 ANAPC4Q9UJX5 808 aa13.42□□□□□ -0.26
XRCC1-204ENST00000594511 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
XRCC1-204ENST00000594511 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 FGAP02671 866 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
XRCC1-204ENST00000594511 FGRP09769 529 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 CYP2D6P10635 497 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 SHMT1P34896 483 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 MAP2K2P36507 400 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 EVX2Q03828 476 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 PRKG1Q13976 671 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 TTLL12Q14166 644 aaPredicted RBP13.41□□□□□ -0.26
XRCC1-204ENST00000594511 SPRYD7Q5W111 196 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 CWC27Q6UX04 472 aaKnown RBP13.41□□□□□ -0.26
XRCC1-204ENST00000594511 C16orf86Q6ZW13 317 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 SLC10A4Q96EP9 437 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 CAPNS2Q96L46 248 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
XRCC1-204ENST00000594511 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-204ENST00000594511 SMIM22K7EJ46 135 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-204ENST00000594511 GJA5P36382 358 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-204ENST00000594511 PPATQ06203 517 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 NOGQ13253 232 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 ERO1BQ86YB8 467 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 ZKSCAN4Q969J2 545 aaPredicted RBP13.4□□□□□ -0.26
XRCC1-204ENST00000594511 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 CSADQ9Y600 493 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 DOCK1Q14185 1865 aa13.4□□□□□ -0.26
XRCC1-204ENST00000594511 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 PTPRAP18433 802 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 CDK8P49336 464 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 JAG1P78504 1218 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 CYP4F22Q6NT55 531 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
XRCC1-204ENST00000594511 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 KCNH4Q9UQ05 1017 aa13.39□□□□□ -0.27
XRCC1-204ENST00000594511 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 TM4SF4P48230 202 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 PPIL2Q13356 520 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
XRCC1-204ENST00000594511 DYNLL2Q96FJ2 89 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 MS4A4AQ96JQ5 239 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 NAPBQ9H115 298 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
XRCC1-204ENST00000594511 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
XRCC1-204ENST00000594511 ATAD5Q96QE3 1844 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 CXCL11O14625 94 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms