RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 FOXP4Q8IVH2 680 aaPredicted RBP21.03■□□□□ 0.96
IRF3-208ENST00000594387 CRBNQ96SW2 442 aa21.03■□□□□ 0.96
IRF3-208ENST00000594387 ZCCHC17Q9NP64 241 aaKnown RBP21.03■□□□□ 0.96
IRF3-208ENST00000594387 ZHX2Q9Y6X8 837 aa21.03■□□□□ 0.96
IRF3-208ENST00000594387 MAGEB6P1A0A0J9YX57 407 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 CXCL11O14625 94 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 AAMPQ13685 434 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 ARHGEF6Q15052 776 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 ZSCAN25Q6NSZ9 544 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 ERO1AQ96HE7 468 aa21.02■□□□□ 0.96
IRF3-208ENST00000594387 FLT1P17948 1338 aa21.02■□□□□ 0.95
IRF3-208ENST00000594387 PTPRAP18433 802 aa21.01■□□□□ 0.95
IRF3-208ENST00000594387 FASTKD5Q7L8L6 764 aaKnown RBP21.01■□□□□ 0.95
IRF3-208ENST00000594387 HAUS7Q99871 368 aa21.01■□□□□ 0.95
IRF3-208ENST00000594387 R3HDMLQ9H3Y0 253 aa21.01■□□□□ 0.95
IRF3-208ENST00000594387 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
IRF3-208ENST00000594387 KCNH4Q9UQ05 1017 aa21.01■□□□□ 0.95
IRF3-208ENST00000594387 PTPRFP10586 1907 aa21■□□□□ 0.95
IRF3-208ENST00000594387 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
IRF3-208ENST00000594387 PDE6AP16499 860 aa21■□□□□ 0.95
IRF3-208ENST00000594387 SP3Q02447 781 aa21■□□□□ 0.95
IRF3-208ENST00000594387 FAM43AQ8N2R8 423 aa21■□□□□ 0.95
IRF3-208ENST00000594387 TBC1D2Q9BYX2 928 aa21■□□□□ 0.95
IRF3-208ENST00000594387 CRNKL1Q9BZJ0 848 aaKnown RBP21■□□□□ 0.95
IRF3-208ENST00000594387 SAP30BPQ9UHR5 308 aaKnown RBP21■□□□□ 0.95
IRF3-208ENST00000594387 PALD1Q9ULE6 856 aa21■□□□□ 0.95
IRF3-208ENST00000594387 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
IRF3-208ENST00000594387 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
IRF3-208ENST00000594387 NAV1Q8NEY1 1877 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 BTBD19C9JJ37 291 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 KIF22Q14807 665 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 ANKRD23Q86SG2 305 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 TTC6Q86TZ1 520 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 AS3MTQ9HBK9 375 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 MYH8P13535 1937 aa20.99■□□□□ 0.95
IRF3-208ENST00000594387 FAM196BA6NMK8 535 aa20.98■□□□□ 0.95
IRF3-208ENST00000594387 CAP2P40123 477 aa20.98■□□□□ 0.95
IRF3-208ENST00000594387 GADL1Q6ZQY3 521 aa20.97■□□□□ 0.95
IRF3-208ENST00000594387 DDRGK1Q96HY6 314 aa20.97■□□□□ 0.95
IRF3-208ENST00000594387 AFG3L2Q9Y4W6 797 aa20.97■□□□□ 0.95
IRF3-208ENST00000594387 SIPA1L1O43166 1804 aa20.97■□□□□ 0.95
IRF3-208ENST00000594387 PDHXO00330 501 aa20.96■□□□□ 0.95
IRF3-208ENST00000594387 ERC2O15083 957 aa20.96■□□□□ 0.95
IRF3-208ENST00000594387 POLR3DP05423 398 aaPredicted RBP20.96■□□□□ 0.95
IRF3-208ENST00000594387 LRRFIP1Q32MZ4 808 aaKnown RBP20.96■□□□□ 0.95
IRF3-208ENST00000594387 EDC3Q96F86 508 aaKnown RBP20.96■□□□□ 0.95
IRF3-208ENST00000594387 GINM1Q9NU53 330 aa20.96■□□□□ 0.95
IRF3-208ENST00000594387 TRIM17Q9Y577 477 aa20.96■□□□□ 0.95
IRF3-208ENST00000594387 TRIM75PA6NK02 468 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 USP17L5A8MUK1 530 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 TLR2O60603 784 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 ASNSP08243 561 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 SLURP2P0DP57 97 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 FBXO46Q6PJ61 603 aaPredicted RBP20.95■□□□□ 0.94
IRF3-208ENST00000594387 AMOTL1Q8IY63 956 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 GCC1Q96CN9 775 aa20.95■□□□□ 0.94
IRF3-208ENST00000594387 RIOK1Q9BRS2 568 aaKnown RBP20.95■□□□□ 0.94
IRF3-208ENST00000594387 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
IRF3-208ENST00000594387 A0A0G2JLL6 359 aaPredicted RBP20.94■□□□□ 0.94
IRF3-208ENST00000594387 ADD2P35612 726 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 UBE3CQ15386 1083 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 PRRT2Q7Z6L0 340 aaPredicted RBP20.94■□□□□ 0.94
IRF3-208ENST00000594387 ZNF280CQ8ND82 737 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 CD99L2Q8TCZ2 262 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 PARK7Q99497 189 aaKnown RBP20.94■□□□□ 0.94
IRF3-208ENST00000594387 EFCC1Q9HA90 598 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 TTC41PQ6P2S7 1318 aa20.94■□□□□ 0.94
IRF3-208ENST00000594387 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
IRF3-208ENST00000594387 RWDD1Q9H446 243 aaPredicted RBP20.93■□□□□ 0.94
IRF3-208ENST00000594387 TCRBV5S4A2TA0A5A2 114 aa20.92■□□□□ 0.94
IRF3-208ENST00000594387 SPP2Q13103 211 aa20.92■□□□□ 0.94
IRF3-208ENST00000594387 PABPC4Q13310 644 aaKnown RBP eCLIP20.92■□□□□ 0.94
IRF3-208ENST00000594387 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
IRF3-208ENST00000594387 EHD4Q9H223 541 aa20.92■□□□□ 0.94
IRF3-208ENST00000594387 MCM9Q9NXL9 1143 aa20.92■□□□□ 0.94
IRF3-208ENST00000594387 HDAC1Q13547 482 aaPredicted RBP20.91■□□□□ 0.94
IRF3-208ENST00000594387 OTOP1Q7RTM1 612 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 LCORLQ8N3X6 602 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 ARMT1Q9H993 441 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 CABP5Q9NP86 173 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 PNMA3Q9UL41 463 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 SLC45A1Q9Y2W3 748 aa20.91■□□□□ 0.94
IRF3-208ENST00000594387 MGAMO43451 1857 aa20.9■□□□□ 0.94
IRF3-208ENST00000594387 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
IRF3-208ENST00000594387 MBD4O95243 580 aa20.9■□□□□ 0.94
IRF3-208ENST00000594387 CCDC84Q86UT8 332 aaPredicted RBP20.9■□□□□ 0.94
IRF3-208ENST00000594387 PROCA1Q8NCQ7 364 aaPredicted RBP20.9■□□□□ 0.94
IRF3-208ENST00000594387 SMCR8Q8TEV9 937 aaPredicted RBP20.9■□□□□ 0.94
IRF3-208ENST00000594387 ATP8A2Q9NTI2 1148 aa20.9■□□□□ 0.94
IRF3-208ENST00000594387 TMOD4Q9NZQ9 345 aa20.9■□□□□ 0.94
IRF3-208ENST00000594387 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.9■□□□□ 0.94
IRF3-208ENST00000594387 HPS5Q9UPZ3 1129 aa20.9■□□□□ 0.94
IRF3-208ENST00000594387 GDF11O95390 407 aa20.89■□□□□ 0.93
IRF3-208ENST00000594387 ZFYP08048 801 aaPredicted RBP20.89■□□□□ 0.93
IRF3-208ENST00000594387 MX1P20591 662 aa20.89■□□□□ 0.93
IRF3-208ENST00000594387 CERKLQ49MI3 558 aaPredicted RBP20.89■□□□□ 0.93
IRF3-208ENST00000594387 KBTBD3Q8NAB2 608 aa20.89■□□□□ 0.93
IRF3-208ENST00000594387 SDR42E1Q8WUS8 393 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms