RNA–Protein interactions for RNA: ENST00000594044.1

ARHGEF1-206, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 834 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-206ENST00000594044 AACSQ86V21 672 aa16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 PI4KBQ9UBF8 816 aa16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 HERC5Q9UII4 1024 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 SLC45A1Q9Y2W3 748 aa16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 MYH1P12882 1939 aa16.5■□□□□ 0.23
ARHGEF1-206ENST00000594044 MGAMO43451 1857 aa16.49■□□□□ 0.23
ARHGEF1-206ENST00000594044 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
ARHGEF1-206ENST00000594044 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
ARHGEF1-206ENST00000594044 ARHGAP39Q9C0H5 1083 aa16.49■□□□□ 0.23
ARHGEF1-206ENST00000594044 BRCA2P51587 3418 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 HMMRO75330 724 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 BCRP11274 1271 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 CTGFP29279 349 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 CAP2P40123 477 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 PRMT2P55345 433 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 KIF22Q14807 665 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 TGFBRAP1Q8WUH2 860 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 KIF1BPQ96EK5 621 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-206ENST00000594044 FLT1P17948 1338 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 CYP7A1P22680 504 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 CERS3Q8IU89 383 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
ARHGEF1-206ENST00000594044 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 IDH1O75874 414 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 MAPKAPK5Q8IW41 473 aa16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
ARHGEF1-206ENST00000594044 TRIM75PA6NK02 468 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 CYP2C8P10632 490 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 C20orf194Q5TEA3 1177 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 MAGEB6Q8N7X4 407 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 ZNF280CQ8ND82 737 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 GINM1Q9NU53 330 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
ARHGEF1-206ENST00000594044 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 USP17L5A8MUK1 530 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 PSMC4P43686 418 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 SPP2Q13103 211 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
ARHGEF1-206ENST00000594044 JAG1P78504 1218 aa16.43■□□□□ 0.22
ARHGEF1-206ENST00000594044 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
ARHGEF1-206ENST00000594044 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
ARHGEF1-206ENST00000594044 ASNSP08243 561 aa16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 OSBPP22059 807 aa16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 HOXD10P28358 340 aa16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
ARHGEF1-206ENST00000594044 APBB1O00213 710 aa16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 EHD4Q9H223 541 aa16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 SAP30BPQ9UHR5 308 aaKnown RBP16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
ARHGEF1-206ENST00000594044 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 FMNL1O95466 1100 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 PDE6AP16499 860 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 ATP5JP18859 108 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 HMGCS2P54868 508 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 FCGRTP55899 365 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 BACE1P56817 501 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 CRACR2BQ8N4Y2 399 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 MYH7P12883 1935 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 CEP290O15078 2479 aa16.4■□□□□ 0.22
ARHGEF1-206ENST00000594044 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF1-206ENST00000594044 USP5P45974 858 aa16.39■□□□□ 0.21
ARHGEF1-206ENST00000594044 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
ARHGEF1-206ENST00000594044 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
ARHGEF1-206ENST00000594044 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms