RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 PDE6AP16499 860 aa24.29■■□□□ 1.48
COPE-204ENST00000593827 CRHR2Q13324 411 aa24.29■■□□□ 1.48
COPE-204ENST00000593827 ARHGEF6Q15052 776 aa24.29■■□□□ 1.48
COPE-204ENST00000593827 ZHX2Q9Y6X8 837 aa24.29■■□□□ 1.48
COPE-204ENST00000593827 PTPRAP18433 802 aa24.28■■□□□ 1.48
COPE-204ENST00000593827 DYNLL1P63167 89 aaKnown RBP24.28■■□□□ 1.48
COPE-204ENST00000593827 FASTKD5Q7L8L6 764 aaKnown RBP24.28■■□□□ 1.48
COPE-204ENST00000593827 ERO1AQ96HE7 468 aa24.28■■□□□ 1.48
COPE-204ENST00000593827 CRNKL1Q9BZJ0 848 aaKnown RBP24.28■■□□□ 1.48
COPE-204ENST00000593827 ANKRD23Q86SG2 305 aa24.27■■□□□ 1.48
COPE-204ENST00000593827 TTC6Q86TZ1 520 aa24.27■■□□□ 1.48
COPE-204ENST00000593827 GINM1Q9NU53 330 aa24.27■■□□□ 1.48
COPE-204ENST00000593827 LRRFIP1Q32MZ4 808 aaKnown RBP24.26■■□□□ 1.47
COPE-204ENST00000593827 FAM43AQ8N2R8 423 aa24.26■■□□□ 1.47
COPE-204ENST00000593827 ZNF532Q9HCE3 1301 aa24.26■■□□□ 1.47
COPE-204ENST00000593827 DOCK2Q92608 1830 aa24.26■■□□□ 1.47
COPE-204ENST00000593827 CASP8AP2Q9UKL3 1982 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 LAMB1P07942 1786 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 BTBD19C9JJ37 291 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 ERC2O15083 957 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 GCC1Q96CN9 775 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 PALD1Q9ULE6 856 aa24.25■■□□□ 1.47
COPE-204ENST00000593827 CAP2P40123 477 aa24.24■■□□□ 1.47
COPE-204ENST00000593827 SP3Q02447 781 aa24.24■■□□□ 1.47
COPE-204ENST00000593827 HDAC1Q13547 482 aaPredicted RBP24.24■■□□□ 1.47
COPE-204ENST00000593827 METTL16Q86W50 562 aaKnown RBP24.24■■□□□ 1.47
COPE-204ENST00000593827 RIOK1Q9BRS2 568 aaKnown RBP24.24■■□□□ 1.47
COPE-204ENST00000593827 R3HDMLQ9H3Y0 253 aa24.24■■□□□ 1.47
COPE-204ENST00000593827 AS3MTQ9HBK9 375 aa24.24■■□□□ 1.47
COPE-204ENST00000593827 SAP30BPQ9UHR5 308 aaKnown RBP24.24■■□□□ 1.47
COPE-204ENST00000593827 AFG3L2Q9Y4W6 797 aa24.24■■□□□ 1.47
COPE-204ENST00000593827 ASNSP08243 561 aa24.23■■□□□ 1.47
COPE-204ENST00000593827 ADD2P35612 726 aa24.23■■□□□ 1.47
COPE-204ENST00000593827 UBE3CQ15386 1083 aa24.23■■□□□ 1.47
COPE-204ENST00000593827 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
COPE-204ENST00000593827 TTC41PQ6P2S7 1318 aa24.23■■□□□ 1.47
COPE-204ENST00000593827 A0A0G2JLL6 359 aaPredicted RBP24.22■■□□□ 1.47
COPE-204ENST00000593827 FAM196BA6NMK8 535 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 TLR2O60603 784 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 KIF22Q14807 665 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 PRRT2Q7Z6L0 340 aaPredicted RBP24.22■■□□□ 1.47
COPE-204ENST00000593827 EDC3Q96F86 508 aaKnown RBP24.22■■□□□ 1.47
COPE-204ENST00000593827 PARK7Q99497 189 aaKnown RBP24.22■■□□□ 1.47
COPE-204ENST00000593827 EHD4Q9H223 541 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 SERPINB13Q9UIV8 391 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 TAOK2Q9UL54 1235 aa24.22■■□□□ 1.47
COPE-204ENST00000593827 TCRBV5S4A2TA0A5A2 114 aa24.21■■□□□ 1.47
COPE-204ENST00000593827 USP17L5A8MUK1 530 aa24.21■■□□□ 1.47
COPE-204ENST00000593827 PDHXO00330 501 aa24.21■■□□□ 1.47
COPE-204ENST00000593827 POLR3DP05423 398 aaPredicted RBP24.21■■□□□ 1.47
COPE-204ENST00000593827 AMOTL1Q8IY63 956 aa24.21■■□□□ 1.47
COPE-204ENST00000593827 RWDD1Q9H446 243 aaPredicted RBP24.21■■□□□ 1.47
COPE-204ENST00000593827 SLC45A1Q9Y2W3 748 aa24.21■■□□□ 1.47
COPE-204ENST00000593827 CCDC85CA6NKD9 419 aa24.2■■□□□ 1.46
COPE-204ENST00000593827 GLRX3O76003 335 aaKnown RBP24.2■■□□□ 1.46
COPE-204ENST00000593827 FBXO46Q6PJ61 603 aaPredicted RBP24.2■■□□□ 1.46
COPE-204ENST00000593827 ZNF280CQ8ND82 737 aa24.2■■□□□ 1.46
COPE-204ENST00000593827 TRIM75PA6NK02 468 aa24.19■■□□□ 1.46
COPE-204ENST00000593827 ZFYP08048 801 aaPredicted RBP24.19■■□□□ 1.46
COPE-204ENST00000593827 GADL1Q6ZQY3 521 aa24.19■■□□□ 1.46
COPE-204ENST00000593827 ATP8A2Q9NTI2 1148 aa24.19■■□□□ 1.46
COPE-204ENST00000593827 SLURP2P0DP57 97 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 PABPC4Q13310 644 aaKnown RBP eCLIP24.18■■□□□ 1.462e-6■□□□□ 9.2
COPE-204ENST00000593827 ANKRD45Q5TZF3 282 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 KBTBD3Q8NAB2 608 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 PROCA1Q8NCQ7 364 aaPredicted RBP24.18■■□□□ 1.46
COPE-204ENST00000593827 EFCC1Q9HA90 598 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 MCM9Q9NXL9 1143 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 TRIM17Q9Y577 477 aa24.18■■□□□ 1.46
COPE-204ENST00000593827 MBD4O95243 580 aa24.17■■□□□ 1.46
COPE-204ENST00000593827 PNMA3Q9UL41 463 aa24.17■■□□□ 1.46
COPE-204ENST00000593827 MX1P20591 662 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 SPP2Q13103 211 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 MOGSQ13724 837 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 LCORLQ8N3X6 602 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 CD99L2Q8TCZ2 262 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 WDR18Q9BV38 432 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 ARMT1Q9H993 441 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 AGTPBP1Q9UPW5 1226 aa24.16■■□□□ 1.46
COPE-204ENST00000593827 GNRH1P01148 92 aa24.15■■□□□ 1.46
COPE-204ENST00000593827 OTOP1Q7RTM1 612 aa24.15■■□□□ 1.46
COPE-204ENST00000593827 DNAJC18Q9H819 358 aa24.15■■□□□ 1.46
COPE-204ENST00000593827 CABP5Q9NP86 173 aa24.15■■□□□ 1.46
COPE-204ENST00000593827 DCP1AQ9NPI6 582 aaPredicted RBP24.15■■□□□ 1.46
COPE-204ENST00000593827 SLC34A2O95436 690 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 SLC4A8Q2Y0W8 1093 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 CERKLQ49MI3 558 aaPredicted RBP24.14■■□□□ 1.45
COPE-204ENST00000593827 GPAT2Q6NUI2 795 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 TATDN1Q6P1N9 297 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 TMOD4Q9NZQ9 345 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 ZBTB21Q9ULJ3 1066 aa24.14■■□□□ 1.45
COPE-204ENST00000593827 SUPT16HQ9Y5B9 1047 aaKnown RBP24.14■■□□□ 1.45
COPE-204ENST00000593827 DOCK1Q14185 1865 aa24.13■■□□□ 1.45
COPE-204ENST00000593827 MYO5AQ9Y4I1 1855 aaKnown RBP24.13■■□□□ 1.45
COPE-204ENST00000593827 C19orf81C9J6K1 198 aa24.13■■□□□ 1.45
COPE-204ENST00000593827 C17orf99Q6UX52 265 aa24.13■■□□□ 1.45
COPE-204ENST00000593827 SMCR8Q8TEV9 937 aaPredicted RBP24.13■■□□□ 1.45
COPE-204ENST00000593827 SDR42E1Q8WUS8 393 aa24.13■■□□□ 1.45
COPE-204ENST00000593827 SWAP70Q9UH65 585 aa24.13■■□□□ 1.45
COPE-204ENST00000593827 HPS5Q9UPZ3 1129 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms