RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 CYP2B6P20813 491 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 GCLCP48506 637 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 ZNF697Q5TEC3 545 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 USP6NLQ92738 828 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 ASCC2Q9H1I8 757 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 TTYH1Q9H313 450 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
RANBP3-230ENST00000593025 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
RANBP3-230ENST00000593025 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
RANBP3-230ENST00000593025 COL9A1P20849 921 aa13.48□□□□□ -0.25
RANBP3-230ENST00000593025 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
RANBP3-230ENST00000593025 SPP2Q13103 211 aa13.48□□□□□ -0.25
RANBP3-230ENST00000593025 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
RANBP3-230ENST00000593025 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
RANBP3-230ENST00000593025 CHD9Q3L8U1 2897 aa13.48□□□□□ -0.25
RANBP3-230ENST00000593025 RLFQ13129 1914 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
RANBP3-230ENST00000593025 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
RANBP3-230ENST00000593025 HMGCS2P54868 508 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 CCL14Q16627 93 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 C9orf50Q5SZB4 431 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 SLC4A10Q6U841 1118 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
RANBP3-230ENST00000593025 SHHQ15465 462 aa13.46□□□□□ -0.25
RANBP3-230ENST00000593025 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
RANBP3-230ENST00000593025 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
RANBP3-230ENST00000593025 LPIN2Q92539 896 aa13.46□□□□□ -0.25
RANBP3-230ENST00000593025 EYA2O00167 538 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 TBC1D12O60347 775 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 RHBDL3P58872 404 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 SH3D19Q5HYK7 790 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 MORN1Q5T089 497 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
RANBP3-230ENST00000593025 SLC5A1P13866 664 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 ZKSCAN1P17029 563 aaPredicted RBP13.44□□□□□ -0.26
RANBP3-230ENST00000593025 PHKA1P46020 1223 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 JAG1P78504 1218 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 PICALMQ13492 652 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 P2RX7Q99572 595 aaKnown RBP13.44□□□□□ -0.26
RANBP3-230ENST00000593025 PORCNQ9H237 461 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 RBPJLQ9UBG7 517 aa13.44□□□□□ -0.26
RANBP3-230ENST00000593025 REV3LO60673 3130 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 ZBTB22O15209 634 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
RANBP3-230ENST00000593025 Q3C1V9 767 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
RANBP3-230ENST00000593025 SOCS4Q8WXH5 440 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 FAM163AQ96GL9 167 aaPredicted RBP13.43□□□□□ -0.26
RANBP3-230ENST00000593025 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 FLRT1Q9NZU1 646 aa13.43□□□□□ -0.26
RANBP3-230ENST00000593025 CAP2P40123 477 aa13.42□□□□□ -0.26
RANBP3-230ENST00000593025 BTDP43251 543 aa13.42□□□□□ -0.26
RANBP3-230ENST00000593025 SHROOM1Q2M3G4 852 aaPredicted RBP13.42□□□□□ -0.26
RANBP3-230ENST00000593025 LBHD1Q9BQE6 289 aaPredicted RBP13.42□□□□□ -0.26
RANBP3-230ENST00000593025 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
RANBP3-230ENST00000593025 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
RANBP3-230ENST00000593025 OSBPL5Q9H0X9 879 aaPredicted RBP13.42□□□□□ -0.26
RANBP3-230ENST00000593025 MROH7-TTC4A0A0A0MT08 1334 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 SEMA3EO15041 775 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 IGHA2P01877 340 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 FOSL2P15408 326 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 ADORA1P30542 326 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 RTP1P59025 263 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 HERVK_113P62684 666 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 PABPC4Q13310 644 aaKnown RBP eCLIP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 MTMR2Q13614 643 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 GPR142Q7Z601 462 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 TRMT44Q8IYL2 757 aaKnown RBP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 GPRC5AQ8NFJ5 357 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 APBA2Q99767 749 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.41□□□□□ -0.26
RANBP3-230ENST00000593025 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
RANBP3-230ENST00000593025 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 NCOR1O75376 2440 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 USP17L5A8MUK1 530 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 TNFRSF10AO00220 468 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 RGS2P41220 211 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
RANBP3-230ENST00000593025 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
RANBP3-230ENST00000593025 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
RANBP3-230ENST00000593025 CNMDO75829 334 aa13.39□□□□□ -0.27
RANBP3-230ENST00000593025 MAPK4P31152 587 aa13.39□□□□□ -0.27
RANBP3-230ENST00000593025 PLA2G5P39877 138 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms