RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FAM151AQ8WW52 585 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
DDX39A-220ENST00000593008 LSG1Q9H089 658 aaKnown RBP11.57□□□□□ -0.56
DDX39A-220ENST00000593008 HELLSQ9NRZ9 838 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 RNF186Q9NXI6 227 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 SLC4A4Q9Y6R1 1079 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 SIPA1L1O43166 1804 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 FLT1P17948 1338 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 CA12O43570 354 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 LDHCP07864 332 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 GJA5P36382 358 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 MAP3K9P80192 1104 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 COL9A3Q14050 684 aaPredicted RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 VGLL4Q14135 290 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 TNS4Q8IZW8 715 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 ZKSCAN4Q969J2 545 aaPredicted RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 WRNIP1Q96S55 665 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 PRDM10Q9NQV6 1147 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 TACC3Q9Y6A5 838 aa11.56□□□□□ -0.56
DDX39A-220ENST00000593008 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
DDX39A-220ENST00000593008 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 HIP1O00291 1037 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
DDX39A-220ENST00000593008 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 CSADQ9Y600 493 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 RAD50Q92878 1312 aa11.55□□□□□ -0.56
DDX39A-220ENST00000593008 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 DDTLA6NHG4 134 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 ENTPD3O75355 529 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 TBC1D8O95759 1140 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 BAG3O95817 575 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 INPP5BP32019 993 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 HAND2P61296 217 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 HOOK2Q96ED9 719 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 CRNKL1Q9BZJ0 848 aaKnown RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 DCP1AQ9NPI6 582 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-220ENST00000593008 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 LAMB1P07942 1786 aa11.54□□□□□ -0.56
DDX39A-220ENST00000593008 UNCXA6NJT0 531 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 IGSF3O75054 1194 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 APPP05067 770 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
DDX39A-220ENST00000593008 USP5P45974 858 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 TM4SF4P48230 202 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 SREBF2Q12772 1141 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
DDX39A-220ENST00000593008 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
DDX39A-220ENST00000593008 TBC1D10CQ8IV04 446 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 SLC44A5Q8NCS7 719 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
DDX39A-220ENST00000593008 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 SAGE1Q9NXZ1 904 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 ATRNL1Q5VV63 1379 aa11.53□□□□□ -0.56
DDX39A-220ENST00000593008 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-220ENST00000593008 CAPN15O75808 1086 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 TDO2P48775 406 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 PLCD1P51178 756 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 IFNL1Q8IU54 200 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 DYNLL2Q96FJ2 89 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 DNAJC18Q9H819 358 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 MCM9Q9NXL9 1143 aa11.52□□□□□ -0.57
DDX39A-220ENST00000593008 RBM8AQ9Y5S9 174 aaKnown RBP11.52□□□□□ -0.57
DDX39A-220ENST00000593008 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 MYH1P12882 1939 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 USP17L21D6R901 530 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDX39A-220ENST00000593008 FGAP02671 866 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 CTR9Q6PD62 1173 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 STOX1Q6ZVD7 989 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 RUFY2Q8WXA3 655 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 PTPN18Q99952 460 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 R3HDMLQ9H3Y0 253 aa11.51□□□□□ -0.57
DDX39A-220ENST00000593008 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-220ENST00000593008 OTOFQ9HC10 1997 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 SPDYE5A6NIY4 337 aa11.5□□□□□ -0.57
DDX39A-220ENST00000593008 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms